RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 SH3GL2Q99962 352 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 SELENOOQ9BVL4 669 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 RBCK1Q9BYM8 510 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 PHACTR1Q9C0D0 580 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 NUCKS1Q9H1E3 243 aaKnown RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 RNF14Q9UBS8 474 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 LRWD1Q9UFC0 647 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 HYOU1Q9Y4L1 999 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 DUSP10Q9Y6W6 482 aa6.32□□□□□ -1.4
VPS33A-203ENST00000536212 DDX60LQ5H9U9 1706 aaKnown RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 TNRC6CQ9HCJ0 1690 aaKnown RBP6.32□□□□□ -1.4
VPS33A-203ENST00000536212 MYO1CO00159 1063 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 PES1O00541 588 aaKnown RBP6.31□□□□□ -1.4
VPS33A-203ENST00000536212 PPFIA4O75335 1185 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 PLEKP08567 350 aaPredicted RBP6.31□□□□□ -1.4
VPS33A-203ENST00000536212 GOLGA8HP0CJ92 632 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 MYBL2P10244 700 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 EPB41P11171 864 aaKnown RBP6.31□□□□□ -1.4
VPS33A-203ENST00000536212 PDHBP11177 359 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 IDEP14735 1019 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 COL8A1P27658 744 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 BTDP43251 543 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 MAGEA1P43355 309 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 SNRPNP63162 240 aaKnown RBP6.31□□□□□ -1.4
VPS33A-203ENST00000536212 CYP27A1Q02318 531 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 GABPAQ06546 454 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 C2orf54Q08AI8 447 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 DGKZQ13574 1117 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 CALCRLQ16602 461 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 DBN1Q16643 649 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 TMEM266Q2M3C6 531 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 GLE1Q53GS7 698 aaKnown RBP6.31□□□□□ -1.4
VPS33A-203ENST00000536212 HGSNATQ68CP4 663 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 PPP4R3AQ6IN85 833 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 CCDC70Q6NSX1 233 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 KRT26Q7Z3Y9 468 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 C2CD5Q86YS7 1000 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 SPATA4Q8NEY3 305 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 CAGE1Q8TC20 777 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 DNAJC19Q96DA6 116 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 MTMR8Q96EF0 704 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 CEP95Q96GE4 821 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 CAPZA3Q96KX2 299 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 CEP63Q96MT8 703 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 PIGSQ96S52 555 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 OSBPL9Q96SU4 736 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 TLR10Q9BXR5 811 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 IFIH1Q9BYX4 1025 aaKnown RBP6.31□□□□□ -1.4
VPS33A-203ENST00000536212 RAB34Q9BZG1 259 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 YY1AP1Q9H869 796 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 FAM204AQ9H8W3 233 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 MLXIPQ9HAP2 919 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 CD209Q9NNX6 404 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 SLC39A2Q9NP94 309 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 SEC63Q9UGP8 760 aaKnown RBP6.31□□□□□ -1.4
VPS33A-203ENST00000536212 SAP30BPQ9UHR5 308 aaKnown RBP6.31□□□□□ -1.4
VPS33A-203ENST00000536212 LCMT1Q9UIC8 334 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 FAM184BQ9ULE4 1060 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 MKL2Q9ULH7 1088 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 STX8Q9UNK0 236 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 JAG2Q9Y219 1238 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 RRP15Q9Y3B9 282 aaKnown RBP6.31□□□□□ -1.4
VPS33A-203ENST00000536212 CAPN6Q9Y6Q1 641 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 MYH13Q9UKX3 1938 aa6.31□□□□□ -1.4
VPS33A-203ENST00000536212 TAF1P21675 1872 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 CCDC88AQ3V6T2 1871 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 ATP8B3O60423 1300 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 MYO3BQ8WXR4 1341 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 MACROD2A1Z1Q3 448 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 GRID2IPA4D2P6 1211 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 LRRC53A6NM62 1247 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 A6NNZ2 444 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 BTNL10A8MVZ5 291 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 SPATA31C2B4DYI2 1134 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 GOLGA8KD6RF30 607 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 SLC37A4O43826 429 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 MOCS3O95396 460 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 TDP2O95551 362 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 GNA14O95837 355 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 SERPING1P05155 500 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 GCFC2P16383 781 aaKnown RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 TXKP42681 527 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 TNNT3P45378 269 aaPredicted RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 ADCY7P51828 1080 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 GPSM2P81274 684 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 FKBP3Q00688 224 aaKnown RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 COASYQ13057 564 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 COL19A1Q14993 1142 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 CCDC96Q2M329 555 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 SLC4A8Q2Y0W8 1093 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 TUBB8Q3ZCM7 444 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 CRY2Q49AN0 593 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 C4orf17Q53FE4 359 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 EAPPQ56P03 285 aaPredicted RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 EMC10Q5UCC4 262 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 KLHDC7AQ5VTJ3 777 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 ALS2CLQ60I27 953 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 HAUS3Q68CZ6 603 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms