RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 MTRQ99707 1265 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 BHMT2Q9H2M3 363 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 TMX1Q9H3N1 280 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SUCLA2Q9P2R7 463 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DAXXQ9UER7 740 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 PADI3Q9ULW8 664 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 NOC2LQ9Y3T9 749 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 MYH11P35749 1972 aa12.61□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ABHD14A-ACY1A0A1B0GW23 586 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CSDE1O75534 798 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 EYA4O95677 639 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 IKBKEQ14164 716 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 KARSQ15046 597 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ZRSR1Q15695 479 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 TMCO2Q7Z6W1 182 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CABP7Q86V35 215 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 RHPN2Q8IUC4 686 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ASAP3Q8TDY4 903 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 PRPF31Q8WWY3 499 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 APBB2Q92870 758 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 JPH2Q9BR39 696 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ATP6V0A4Q9HBG4 840 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ERVK-5Q9HDB9 667 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 GPRC5CQ9NQ84 441 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 COL4A3BPQ9Y5P4 624 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SLC4A7Q9Y6M7 1214 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 COL4A6Q14031 1691 aa12.6□□□□□ -0.39
TNFRSF1A-208ENST00000536194 TTC3P53804 2025 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 A0A087WZ62 844 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ARHGEF35A5YM69 484 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SPTLC2O15270 562 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 GAS2O43903 313 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 MGEA5O60502 916 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 YEATS4O95619 227 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DARSP14868 501 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 FGFR4P22455 802 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 EIF4BP23588 611 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 ARL2P36404 184 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 PBX2P40425 430 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 DNM2P50570 870 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 LAMTOR4Q0VGL1 99 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 STK38Q15208 465 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 PADI6Q6TGC4 694 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 MAEAQ7L5Y9 396 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 RTN4RL1Q86UN2 441 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 EXOC8Q8IYI6 725 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 USP38Q8NB14 1042 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 NLRP7Q8WX94 980 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 PSPC1Q8WXF1 523 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 SYMPKQ92797 1274 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 NLRP4Q96MN2 994 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CCDC43Q96MW1 224 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 FDXACB1Q9BRP7 624 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 CCSER1Q9C0I3 900 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 MTIF3Q9H2K0 278 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 IFT122Q9HBG6 1241 aa12.59□□□□□ -0.39
TNFRSF1A-208ENST00000536194 A0A087X0B3 334 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PPP6R2O75170 966 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RPS6KA5O75582 802 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ATP2A2P16615 1042 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CYP11B2P19099 503 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PLCG1P19174 1290 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 GLRA2P23416 452 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 UBA7P41226 1012 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RABGGTBP53611 331 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SMAD3P84022 425 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PAK2Q13177 524 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CAPSQ13938 189 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 AXDND1Q5T1B0 1012 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ATL3Q6DD88 541 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ZNF410Q86VK4 478 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ZNF710Q8N1W2 664 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 TCP11Q8WWU5 503 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SCLT1Q96NL6 688 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SLC9A7Q96T83 725 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RUSC1Q9BVN2 902 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 PBX4Q9BYU1 374 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NT5C3AQ9H0P0 336 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 POLR3FQ9H1D9 316 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 MINDY3Q9H8M7 445 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 BLOC1S4Q9NUP1 217 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ST3GAL5Q9UNP4 418 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 DNM3Q9UQ16 869 aa12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 LAMA2P24043 3122 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SLC26A4O43511 780 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 EFCAB14O75071 495 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SRGAP2CP0DJJ0 459 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 MYOGP15173 224 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 KCNJ6P48051 423 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SLC12A3P55017 1021 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 NFX1Q12986 1120 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 MAPK7Q13164 816 aa12.57□□□□□ -0.4
TNFRSF1A-208ENST00000536194 DSC3Q14574 896 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms