RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 C5orf42Q9H799 3197 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 BMP2KQ9NSY1 1161 aaPredicted RBP18.36■□□□□ 0.53
ATL3-202ENST00000535789 DARSP14868 501 aaKnown RBP18.35■□□□□ 0.53
ATL3-202ENST00000535789 U2AF2P26368 475 aaKnown RBP eCLIP18.35■□□□□ 0.53
ATL3-202ENST00000535789 YWHABP31946 246 aaKnown RBP18.35■□□□□ 0.53
ATL3-202ENST00000535789 SAFBQ15424 915 aaKnown RBP eCLIP18.35■□□□□ 0.53
ATL3-202ENST00000535789 ZNF174Q15697 407 aa18.35■□□□□ 0.53
ATL3-202ENST00000535789 NPAS4Q8IUM7 802 aa18.35■□□□□ 0.53
ATL3-202ENST00000535789 C4orf32Q8N8J7 132 aa18.35■□□□□ 0.53
ATL3-202ENST00000535789 ADAM2Q99965 735 aa18.35■□□□□ 0.53
ATL3-202ENST00000535789 XPNPEP1Q9NQW7 623 aa18.35■□□□□ 0.53
ATL3-202ENST00000535789 RGS18Q9NS28 235 aa18.35■□□□□ 0.53
ATL3-202ENST00000535789 RNF19AQ9NV58 838 aa18.35■□□□□ 0.53
ATL3-202ENST00000535789 HCSTQ9UBK5 93 aa18.35■□□□□ 0.53
ATL3-202ENST00000535789 PCDHA12Q9UN75 941 aa18.35■□□□□ 0.53
ATL3-202ENST00000535789 TDRD15B5MCY1 1934 aaKnown RBP18.35■□□□□ 0.53
ATL3-202ENST00000535789 A0A087WWV3 80 aa18.34■□□□□ 0.53
ATL3-202ENST00000535789 A0A087WZ62 844 aa18.34■□□□□ 0.53
ATL3-202ENST00000535789 BAG4O95429 457 aaKnown RBP18.34■□□□□ 0.53
ATL3-202ENST00000535789 SPATA31C1P0DKV0 1188 aa18.34■□□□□ 0.53
ATL3-202ENST00000535789 EIF4BP23588 611 aaKnown RBP18.34■□□□□ 0.53
ATL3-202ENST00000535789 TMOD1P28289 359 aa18.34■□□□□ 0.53
ATL3-202ENST00000535789 GJB2P29033 226 aa18.34■□□□□ 0.53
ATL3-202ENST00000535789 SARSP49591 514 aaKnown RBP18.34■□□□□ 0.53
ATL3-202ENST00000535789 TTC38Q5R3I4 469 aa18.34■□□□□ 0.53
ATL3-202ENST00000535789 FBXO22Q8NEZ5 403 aa18.34■□□□□ 0.53
ATL3-202ENST00000535789 CLP1Q92989 425 aaKnown RBP18.34■□□□□ 0.53
ATL3-202ENST00000535789 FDXACB1Q9BRP7 624 aaPredicted RBP18.34■□□□□ 0.53
ATL3-202ENST00000535789 MRPL42Q9Y6G3 142 aaKnown RBP18.34■□□□□ 0.53
ATL3-202ENST00000535789 MARCH6O60337 910 aa18.33■□□□□ 0.52
ATL3-202ENST00000535789 MED24O75448 989 aa18.33■□□□□ 0.52
ATL3-202ENST00000535789 LYPLA2O95372 231 aa18.33■□□□□ 0.52
ATL3-202ENST00000535789 IBSPP21815 317 aaPredicted RBP18.33■□□□□ 0.52
ATL3-202ENST00000535789 EMC2Q15006 297 aa18.33■□□□□ 0.52
ATL3-202ENST00000535789 TMEM192Q8IY95 271 aa18.33■□□□□ 0.52
ATL3-202ENST00000535789 FIBCD1Q8N539 461 aa18.33■□□□□ 0.52
ATL3-202ENST00000535789 CEP170P1Q96L14 293 aa18.33■□□□□ 0.52
ATL3-202ENST00000535789 ZSWIM4Q9H7M6 989 aa18.33■□□□□ 0.52
ATL3-202ENST00000535789 SUCLA2Q9P2R7 463 aaPredicted RBP18.33■□□□□ 0.52
ATL3-202ENST00000535789 TTC28Q96AY4 2481 aa18.33■□□□□ 0.52
ATL3-202ENST00000535789 GPR182O15218 404 aa18.32■□□□□ 0.52
ATL3-202ENST00000535789 OR52Z1P0C646 297 aa18.32■□□□□ 0.52
ATL3-202ENST00000535789 ATF7P17544 494 aaPredicted RBP18.32■□□□□ 0.52
ATL3-202ENST00000535789 ANP32AP39687 249 aaKnown RBP18.32■□□□□ 0.52
ATL3-202ENST00000535789 PAN2Q504Q3 1202 aaKnown RBP18.32■□□□□ 0.52
ATL3-202ENST00000535789 RHPN2Q8IUC4 686 aa18.32■□□□□ 0.52
ATL3-202ENST00000535789 TPH2Q8IWU9 490 aa18.32■□□□□ 0.52
ATL3-202ENST00000535789 IL27Q8NEV9 243 aa18.32■□□□□ 0.52
ATL3-202ENST00000535789 NLRP7Q8WX94 980 aa18.32■□□□□ 0.52
ATL3-202ENST00000535789 TMEM143Q96AN5 459 aa18.32■□□□□ 0.52
ATL3-202ENST00000535789 IFT122Q9HBG6 1241 aa18.32■□□□□ 0.52
ATL3-202ENST00000535789 PCDHB6Q9Y5E3 794 aa18.32■□□□□ 0.52
ATL3-202ENST00000535789 DENND3A2RUS2 1198 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 C5orf67F2Z3F1 127 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 H3BNC9 293 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 CTNNB1P35222 781 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 POLGP54098 1239 aaPredicted RBP18.31■□□□□ 0.52
ATL3-202ENST00000535789 FAM189BP81408 668 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 ORC2Q13416 577 aaPredicted RBP18.31■□□□□ 0.52
ATL3-202ENST00000535789 BTG3Q14201 252 aaPredicted RBP18.31■□□□□ 0.52
ATL3-202ENST00000535789 XKR9Q5GH70 373 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 FAM102BQ5T8I3 360 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 SLC24A5Q71RS6 500 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 CMTR2Q8IYT2 770 aaKnown RBP18.31■□□□□ 0.52
ATL3-202ENST00000535789 NEK9Q8TD19 979 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 SNX21Q969T3 373 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 SAMD11Q96NU1 681 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 MINDY3Q9H8M7 445 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 C1orf112Q9NSG2 853 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 COL4A3BPQ9Y5P4 624 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 TRIP11Q15643 1979 aa18.31■□□□□ 0.52
ATL3-202ENST00000535789 GTPBP6O43824 516 aaPredicted RBP18.3■□□□□ 0.52
ATL3-202ENST00000535789 DKC1O60832 514 aaKnown RBP eCLIP18.3■□□□□ 0.52
ATL3-202ENST00000535789 FGFR1P11362 822 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 RFC5P40937 340 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 TECP42680 631 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 TRAPPC10P48553 1259 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 RARRES1P49788 294 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 IL17AQ16552 155 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 ECM1Q16610 540 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 ZNF410Q86VK4 478 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 CATSPER3Q86XQ3 398 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 PIGOQ8TEQ8 1089 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 NLRP4Q96MN2 994 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 SCLT1Q96NL6 688 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 COL25A1Q9BXS0 654 aaPredicted RBP18.3■□□□□ 0.52
ATL3-202ENST00000535789 THEGQ9P2T0 379 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 PPME1Q9Y570 386 aa18.3■□□□□ 0.52
ATL3-202ENST00000535789 GRM6O15303 877 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 BMPR1AP36894 532 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 MCM2P49736 904 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 TFF2Q03403 129 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 GPM6BQ13491 265 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 CUL4AQ13619 759 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 CAMK1Q14012 370 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 POTEGQ6S5H5 508 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 ZNF598Q86UK7 904 aaKnown RBP18.29■□□□□ 0.52
ATL3-202ENST00000535789 ASAP3Q8TDY4 903 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 PRPF31Q8WWY3 499 aaKnown RBP18.29■□□□□ 0.52
ATL3-202ENST00000535789 SLC7A3Q8WY07 619 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms