RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 RPS9P46781 194 aaKnown RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 POLGP54098 1239 aaPredicted RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 MTAPQ13126 283 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 WTAPQ15007 396 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 SF3A2Q15428 464 aaKnown RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 RSPO2Q6UXX9 243 aaPredicted RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 LURAP1LQ8IV03 231 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 CMASQ8NFW8 434 aaPredicted RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 NELL2Q99435 816 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 RPP25Q9BUL9 199 aaKnown RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 ERAP1Q9NZ08 941 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.23□□□□□ -0.457e-7■□□□□ 9.9
CSDE1-215ENST00000533818 DACH1Q9UI36 760 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 ST3GAL5Q9UNP4 418 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 NOC2LQ9Y3T9 749 aaKnown RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 LOC400499M0QZD8 3231 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 TDGF1P13385 188 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 INSRRP14616 1297 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 CLCN4P51793 760 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 BCAR1P56945 870 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 PPP2R5DQ14738 602 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 QRICH1Q2TAL8 776 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 ODR4Q5SWX8 454 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 CYP26C1Q6V0L0 522 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 PDZD3Q86UT5 571 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 NME8Q8N427 588 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 EMILIN2Q9BXX0 1053 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 TOMM22Q9NS69 142 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
CSDE1-215ENST00000533818 RNF19AQ9NV58 838 aa12.22□□□□□ -0.45
CSDE1-215ENST00000533818 SMG1Q96Q15 3661 aaKnown RBP12.22□□□□□ -0.45
CSDE1-215ENST00000533818 PATJQ8NI35 1801 aa12.21□□□□□ -0.45
CSDE1-215ENST00000533818 OPLAHO14841 1288 aa12.21□□□□□ -0.45
CSDE1-215ENST00000533818 GPR182O15218 404 aa12.21□□□□□ -0.45
CSDE1-215ENST00000533818 TOP3BO95985 862 aaKnown RBP12.21□□□□□ -0.45
CSDE1-215ENST00000533818 TARSP26639 723 aaKnown RBP12.21□□□□□ -0.45
CSDE1-215ENST00000533818 NOVA1P51513 510 aaKnown RBP12.21□□□□□ -0.45
CSDE1-215ENST00000533818 C19orf48Q6RUI8 117 aa12.21□□□□□ -0.45
CSDE1-215ENST00000533818 DDX53Q86TM3 631 aaKnown RBP12.21□□□□□ -0.45
CSDE1-215ENST00000533818 KBTBD3Q8NAB2 608 aa12.21□□□□□ -0.45
CSDE1-215ENST00000533818 SCNM1Q9BWG6 230 aa12.21□□□□□ -0.45
CSDE1-215ENST00000533818 CDHR5Q9HBB8 845 aa12.21□□□□□ -0.45
CSDE1-215ENST00000533818 MAP3K20Q9NYL2 800 aaKnown RBP12.21□□□□□ -0.45
CSDE1-215ENST00000533818 PCDHA2Q9Y5H9 948 aa12.21□□□□□ -0.45
CSDE1-215ENST00000533818 KAT6AQ92794 2004 aa12.21□□□□□ -0.46
CSDE1-215ENST00000533818 MIA3Q5JRA6 1907 aa12.21□□□□□ -0.46
CSDE1-215ENST00000533818 FIBPO43427 364 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 HRO43593 1189 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 ORC4O43929 436 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 DHX16O60231 1041 aaKnown RBP12.2□□□□□ -0.46
CSDE1-215ENST00000533818 ZFYP08048 801 aaPredicted RBP12.2□□□□□ -0.46
CSDE1-215ENST00000533818 GHRHRQ02643 423 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 ZNF252P-AS1Q0IIN9 211 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 CCDC6Q16204 474 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 FCHSD1Q86WN1 690 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 ADAM32Q8TC27 787 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 SMG7Q92540 1137 aaKnown RBP12.2□□□□□ -0.46
CSDE1-215ENST00000533818 INPP4AQ96PE3 977 aaPredicted RBP12.2□□□□□ -0.46
CSDE1-215ENST00000533818 RHOBTB2Q9BYZ6 727 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 SMARCAD1Q9H4L7 1026 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 VAT1LQ9HCJ6 419 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 MAN1C1Q9NR34 630 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 TCP11L1Q9NUJ3 509 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 RTEL1Q9NZ71 1219 aa12.2□□□□□ -0.46
CSDE1-215ENST00000533818 SMIM35A0A1B0GVV1 85 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 GIPC1O14908 333 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 INPPL1O15357 1258 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 CNPP09543 421 aaKnown RBP12.19□□□□□ -0.46
CSDE1-215ENST00000533818 MRPS9P82933 396 aaKnown RBP12.19□□□□□ -0.46
CSDE1-215ENST00000533818 PFKPQ01813 784 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 RRP12Q5JTH9 1297 aaKnown RBP12.19□□□□□ -0.46
CSDE1-215ENST00000533818 PARM1Q6UWI2 310 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 GET4Q7L5D6 327 aaPredicted RBP12.19□□□□□ -0.46
CSDE1-215ENST00000533818 TMEM173Q86WV6 379 aaPredicted RBP12.19□□□□□ -0.46
CSDE1-215ENST00000533818 RNF169Q8NCN4 708 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 TMEM40Q8WWA1 233 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 SEPT1Q8WYJ6 367 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 TTC14Q96N46 770 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 SENP7Q9BQF6 1050 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 PIDD1Q9HB75 910 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 LOXHD1Q8IVV2 1947 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 COL4A3Q01955 1670 aa12.19□□□□□ -0.46
CSDE1-215ENST00000533818 RFPL2O75678 378 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 STAM2O75886 525 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 ZNF806P0C7X5 589 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 MYBP10242 640 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 ADCY1Q08828 1119 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 SRSF5Q13243 272 aaKnown RBP12.18□□□□□ -0.46
CSDE1-215ENST00000533818 FZD5Q13467 585 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 DSC3Q14574 896 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 CLLU1OSQ5K130 101 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 ELMSAN1Q6PJG2 1045 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 ZNF852Q6ZMS4 543 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 MAMSTRQ6ZN01 415 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 TPRG1Q6ZUI0 275 aa12.18□□□□□ -0.46
CSDE1-215ENST00000533818 FAM160A2Q8N612 972 aaPredicted RBP12.18□□□□□ -0.46
CSDE1-215ENST00000533818 SAMD3Q8N6K7 520 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms