RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 KCNH2Q12809 1159 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 COASYQ13057 564 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 DHX34Q14147 1143 aaKnown RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 CTTNQ14247 550 aaKnown RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 FAM83BQ5T0W9 1011 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 SUSD4Q5VX71 490 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 GDAP1Q8TB36 358 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 SCG3Q8WXD2 468 aaKnown RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 TMEM47Q9BQJ4 181 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 KIFC3Q9BVG8 833 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 GOLPH3LQ9H4A5 285 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 SAYSD1Q9NPB0 183 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 STOML1Q9UBI4 398 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 ANAPC7Q9UJX3 599 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 FEM1BQ9UK73 627 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 IQGAP3Q86VI3 1631 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 CLRN2A0PK11 232 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 GMNCA6NCL1 334 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 CFAP73A6NFT4 308 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 ORC4O43929 436 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 ACSL3O95573 720 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 IGKV5-2P06315 115 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 FDX1P10109 184 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 CIITAP33076 1130 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 AP3M2P53677 418 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 EAPPQ56P03 285 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 RTKN2Q8IZC4 609 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 SKA2Q8WVK7 121 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 FAF2Q96CS3 445 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 CFAP36Q96G28 342 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 ELAC2Q9BQ52 826 aaKnown RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 APOL6Q9BWW8 343 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 TAF1DQ9H5J8 278 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 DDX56Q9NY93 547 aaKnown RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 NEDD4P46934 1319 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PNPLA7Q6ZV29 1317 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 APOEP02649 317 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PMS2P54278 862 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PEX3P56589 373 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 TAP1Q03518 808 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PTPN21Q16825 1174 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 SFR1Q86XK3 245 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 RNF139Q8WU17 664 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PIGBQ92521 554 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 MAML1Q92585 1016 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 GFM2Q969S9 779 aaKnown RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 BARHL2Q9NY43 387 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PRDM4Q9UKN5 801 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 APOBEC2Q9Y235 224 aaKnown RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 PALLDQ8WX93 1383 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 UTYO14607 1347 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 CYP2D7A0A087X1C5 515 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 RASA4BC9J798 803 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 RASA4O43374 803 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 HSPA4LO95757 839 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 CYP2E1P05181 493 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 KRT7P08729 469 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 KCNA4P22459 653 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 DRP2Q13474 957 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 TRIP13Q15645 432 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 C7orf31Q8N865 590 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 NDE1Q9NXR1 346 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 SNX24Q9Y343 169 aa7.49□□□□□ -1.21
CTNND1-236ENST00000533667 MORC2Q9Y6X9 1032 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-236ENST00000533667 USP42Q9H9J4 1324 aaKnown RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 TADA3O75528 432 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 CD58P19256 250 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 NCF2P19878 526 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 USP11P51784 963 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 TMPRSS15P98073 1019 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ATP2C1P98194 919 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ADCY1Q08828 1119 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 RCSD1Q6JBY9 416 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 EPM2AIP1Q7L775 607 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 NDUFAF2Q8N183 169 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ENAHQ8N8S7 591 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 RMI1Q9H9A7 625 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 VIPAS39Q9H9C1 493 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 SENP1Q9P0U3 644 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 IP6K2Q9UHH9 426 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 CAPN11Q9UMQ6 739 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 KIAA0391O15091 583 aaKnown RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 GYG2O15488 501 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 HNRNPCL1O60812 293 aaKnown RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 RPS6KA4O75676 772 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 GGCXP38435 758 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 CASP2P42575 452 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 PDCLQ13371 301 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 PADI6Q6TGC4 694 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 C4orf50Q6ZRC1 276 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 SYDE1Q6ZW31 735 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ACAD11Q709F0 780 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 CYB5R4Q7L1T6 521 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 FRMD5Q7Z6J6 570 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 DHX40Q8IX18 779 aaKnown RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ZBTB18Q99592 522 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 C2orf40Q9H1Z8 148 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 TOPORSQ9NS56 1045 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 SUN2Q9UH99 717 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms