RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 WRAP73Q9P2S5 460 aaPredicted RBP18.63■□□□□ 0.57
PKP3-209ENST00000533069 THEGQ9P2T0 379 aa18.63■□□□□ 0.57
PKP3-209ENST00000533069 GAS2O43903 313 aaKnown RBP18.62■□□□□ 0.57
PKP3-209ENST00000533069 MGEA5O60502 916 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 LYPLA2O95372 231 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 ATP2B1P20020 1258 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 MCM7P33993 719 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 ZNF410Q86VK4 478 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 CLP1Q92989 425 aaKnown RBP18.62■□□□□ 0.57
PKP3-209ENST00000533069 TMX3Q96JJ7 454 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 HSD17B14Q9BPX1 270 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 EIF2AK1Q9BQI3 630 aaKnown RBP18.62■□□□□ 0.57
PKP3-209ENST00000533069 GCOM2Q9BZD3 368 aaPredicted RBP18.62■□□□□ 0.57
PKP3-209ENST00000533069 RGL1Q9NZL6 768 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 SUCLA2Q9P2R7 463 aaPredicted RBP18.62■□□□□ 0.57
PKP3-209ENST00000533069 NOL7Q9UMY1 257 aaKnown RBP18.62■□□□□ 0.57
PKP3-209ENST00000533069 PCDHB7Q9Y5E2 793 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 MYH9P35579 1960 aaKnown RBP18.62■□□□□ 0.57
PKP3-209ENST00000533069 A0A0C4DFX4 3053 aa18.62■□□□□ 0.57
PKP3-209ENST00000533069 PRUNE2Q8WUY3 3088 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 C9IYK1 514 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 C5orf67F2Z3F1 127 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 H3BNC9 293 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 SLITRK3O94933 977 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 RB1P06400 928 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 U2AF2P26368 475 aaKnown RBP eCLIP18.61■□□□□ 0.57
PKP3-209ENST00000533069 POLGP54098 1239 aaPredicted RBP18.61■□□□□ 0.57
PKP3-209ENST00000533069 NPEPPSP55786 919 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 CYP4A11Q02928 519 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 DRP2Q13474 957 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 CTTNQ14247 550 aaKnown RBP18.61■□□□□ 0.57
PKP3-209ENST00000533069 DSC3Q14574 896 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 PTPROQ16827 1216 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 TPH2Q8IWU9 490 aa18.61■□□□□ 0.57
PKP3-209ENST00000533069 ATXN2LQ8WWM7 1075 aaKnown RBP18.61■□□□□ 0.57
PKP3-209ENST00000533069 INTS4Q96HW7 963 aaKnown RBP18.61■□□□□ 0.57
PKP3-209ENST00000533069 INO80BQ9C086 356 aaPredicted RBP18.61■□□□□ 0.57
PKP3-209ENST00000533069 DHX33Q9H6R0 707 aaKnown RBP18.61■□□□□ 0.57
PKP3-209ENST00000533069 ELAC1Q9H777 363 aaKnown RBP18.61■□□□□ 0.57
PKP3-209ENST00000533069 COL4A4P53420 1690 aaPredicted RBP18.6■□□□□ 0.57
PKP3-209ENST00000533069 OR52Z1P0C646 297 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 LINC00271P0C7V0 271 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 ZSCAN20P17040 1043 aaPredicted RBP18.6■□□□□ 0.57
PKP3-209ENST00000533069 CTNNB1P35222 781 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 BMPR1AP36894 532 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 FAM189BP81408 668 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 GPM6BQ13491 265 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 XKR9Q5GH70 373 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 TTC38Q5R3I4 469 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 RHPN2Q8IUC4 686 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 C11orf84Q9BUA3 381 aaPredicted RBP18.6■□□□□ 0.57
PKP3-209ENST00000533069 TMEM60Q9H2L4 133 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 TMEM161AQ9NX61 479 aa18.6■□□□□ 0.57
PKP3-209ENST00000533069 CD2BP2O95400 341 aaKnown RBP18.59■□□□□ 0.57
PKP3-209ENST00000533069 HSP90AA1P07900 732 aaKnown RBP18.59■□□□□ 0.57
PKP3-209ENST00000533069 SFPQP23246 707 aaKnown RBP eCLIP18.59■□□□□ 0.57
PKP3-209ENST00000533069 SKIV2LQ15477 1246 aaKnown RBP18.59■□□□□ 0.57
PKP3-209ENST00000533069 TCP11Q8WWU5 503 aa18.59■□□□□ 0.57
PKP3-209ENST00000533069 PSPC1Q8WXF1 523 aaKnown RBP18.59■□□□□ 0.57
PKP3-209ENST00000533069 MRPL38Q96DV4 380 aaKnown RBP18.59■□□□□ 0.57
PKP3-209ENST00000533069 ZNF668Q96K58 619 aaPredicted RBP18.59■□□□□ 0.57
PKP3-209ENST00000533069 CCDC43Q96MW1 224 aaKnown RBP18.59■□□□□ 0.57
PKP3-209ENST00000533069 PLVAPQ9BX97 442 aa18.59■□□□□ 0.57
PKP3-209ENST00000533069 PRDM6Q9NQX0 595 aa18.59■□□□□ 0.57
PKP3-209ENST00000533069 ANKEF1Q9NU02 776 aa18.59■□□□□ 0.57
PKP3-209ENST00000533069 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.59■□□□□ 0.57
PKP3-209ENST00000533069 COL4A3BPQ9Y5P4 624 aa18.59■□□□□ 0.57
PKP3-209ENST00000533069 A0A087WZ62 844 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 POTEMA6NI47 508 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 HOXA2O43364 376 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 CUL4AQ13619 759 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 EMC2Q15006 297 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 ZNF174Q15697 407 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 TIGD5Q53EQ6 642 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 TJAP1Q5JTD0 557 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 ZNF579Q8NAF0 562 aaKnown RBP18.58■□□□□ 0.56
PKP3-209ENST00000533069 FDXACB1Q9BRP7 624 aaPredicted RBP18.58■□□□□ 0.56
PKP3-209ENST00000533069 LMAN2LQ9H0V9 348 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 ATP6V0A4Q9HBG4 840 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 TUFT1Q9NNX1 390 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 CHST12Q9NRB3 414 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 DACT1Q9NYF0 836 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 COG5Q9UP83 839 aa18.58■□□□□ 0.56
PKP3-209ENST00000533069 MRPL42Q9Y6G3 142 aaKnown RBP18.58■□□□□ 0.56
PKP3-209ENST00000533069 TTC3P53804 2025 aa18.57■□□□□ 0.56
PKP3-209ENST00000533069 DLL1O00548 723 aa18.57■□□□□ 0.56
PKP3-209ENST00000533069 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
PKP3-209ENST00000533069 MRPS5P82675 430 aaKnown RBP18.57■□□□□ 0.56
PKP3-209ENST00000533069 AAK1Q2M2I8 961 aa18.57■□□□□ 0.56
PKP3-209ENST00000533069 NAALADL2Q58DX5 795 aa18.57■□□□□ 0.56
PKP3-209ENST00000533069 ERMNQ8TAM6 284 aa18.57■□□□□ 0.56
PKP3-209ENST00000533069 PRPF31Q8WWY3 499 aaKnown RBP18.57■□□□□ 0.56
PKP3-209ENST00000533069 SYMPKQ92797 1274 aaKnown RBP18.57■□□□□ 0.56
PKP3-209ENST00000533069 NLRP4Q96MN2 994 aa18.57■□□□□ 0.56
PKP3-209ENST00000533069 MTRQ99707 1265 aa18.57■□□□□ 0.56
PKP3-209ENST00000533069 ZBTB39O15060 712 aa18.56■□□□□ 0.56
PKP3-209ENST00000533069 ASAP2O43150 1006 aa18.56■□□□□ 0.56
PKP3-209ENST00000533069 DGAT1O75907 488 aa18.56■□□□□ 0.56
PKP3-209ENST00000533069 XRCC6P12956 609 aaKnown RBP eCLIP18.56■□□□□ 0.56
PKP3-209ENST00000533069 IBSPP21815 317 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms