RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CKAP2LQ8IYA6 745 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 PCSK9Q8NBP7 692 aaKnown RBP7.24□□□□□ -1.25
CD44-214ENST00000525211 ASAP3Q8TDY4 903 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 RAD54LQ92698 747 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 TATDN2Q93075 761 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 HPS3Q969F9 1004 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 TMEM143Q96AN5 459 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 TRIM43Q96BQ3 446 aaPredicted RBP7.24□□□□□ -1.25
CD44-214ENST00000525211 SCAND2PQ9GZW5 306 aaPredicted RBP7.24□□□□□ -1.25
CD44-214ENST00000525211 BHMT2Q9H2M3 363 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 IKZF4Q9H2S9 585 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 AZI2Q9H6S1 392 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 ZSWIM4Q9H7M6 989 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 CYP26B1Q9NR63 512 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 ERAP1Q9NZ08 941 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 GTF2IRD1Q9UHL9 959 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 USP20Q9Y2K6 914 aa7.24□□□□□ -1.25
CD44-214ENST00000525211 MYH9P35579 1960 aaKnown RBP7.23□□□□□ -1.25
CD44-214ENST00000525211 IGKV6-21A0A0C4DH24 114 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 A0A0U1RQG5 324 aaPredicted RBP7.23□□□□□ -1.25
CD44-214ENST00000525211 A0A1W2PQ27 194 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 A0A1W2PQ64 194 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 A0A1W2PQD8 194 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 C17orf102A2RUQ5 167 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 MBLAC1A4D2B0 266 aaPredicted RBP7.23□□□□□ -1.25
CD44-214ENST00000525211 ZEB2O60315 1214 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 HBP1O60381 514 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 KPNA6O60684 536 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 PQBP1O60828 265 aaKnown RBP7.23□□□□□ -1.25
CD44-214ENST00000525211 CSDE1O75534 798 aaKnown RBP7.23□□□□□ -1.25
CD44-214ENST00000525211 EYA4O95677 639 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 VTNP04004 478 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 EDN1P05305 212 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 CYP11B2P19099 503 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 FGFR4P22455 802 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 MCM4P33991 863 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 UBA7P41226 1012 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 TMEM62Q0P6H9 643 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 RINT1Q6NUQ1 792 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 DYMQ7RTS9 669 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 SESTD1Q86VW0 696 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 KIAA0319LQ8IZA0 1049 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 SYT2Q8N9I0 419 aaPredicted RBP7.23□□□□□ -1.25
CD44-214ENST00000525211 ANKLE1Q8NAG6 615 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 GLIS3Q8NEA6 775 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 NEK9Q8TD19 979 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 DNAJB3Q8WWF6 145 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 MRPS27Q92552 414 aaKnown RBP7.23□□□□□ -1.25
CD44-214ENST00000525211 ATP6V0A1Q93050 837 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 DNAJC19Q96DA6 116 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 CEP170P1Q96L14 293 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 AK8Q96MA6 479 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 GLT1D1Q96MS3 346 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 BLZF1Q9H2G9 400 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 DHX33Q9H6R0 707 aaKnown RBP7.23□□□□□ -1.25
CD44-214ENST00000525211 KCNH3Q9ULD8 1083 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 ATP11BQ9Y2G3 1177 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 ATP6V1DQ9Y5K8 247 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 EVPLQ92817 2033 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 ADGRA3Q8IWK6 1321 aa7.23□□□□□ -1.25
CD44-214ENST00000525211 ARID2Q68CP9 1835 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 SMAPO00193 183 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 KLRC4O43908 158 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 HIP1RO75146 1068 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 MAFO75444 373 aaPredicted RBP7.22□□□□□ -1.25
CD44-214ENST00000525211 ZNF202O95125 648 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 CHRNA1P02708 482 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 SSBP05455 408 aaKnown RBP eCLIP7.22□□□□□ -1.25
CD44-214ENST00000525211 SYN1P17600 705 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 GLRA2P23416 452 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 AFMP43652 599 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 MGAT3Q09327 533 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 CUL4BQ13620 913 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 GIT2Q14161 759 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 EMC2Q15006 297 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 PTGISQ16647 500 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 ZNF484Q5JVG2 852 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 VARS2Q5ST30 1063 aaKnown RBP7.22□□□□□ -1.25
CD44-214ENST00000525211 RRAGBQ5VZM2 374 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 EFCAB12Q6NXP0 572 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 NFRKBQ6P4R8 1299 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 NECAB2Q7Z6G3 386 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 SERINC5Q86VE9 423 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 PACS2Q86VP3 889 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 GPBP1Q86WP2 473 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 C7orf31Q8N865 590 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 TMEM40Q8WWA1 233 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 PAGE5Q96GU1 130 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 SCLYQ96I15 445 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 NACC1Q96RE7 527 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 FIZ1Q96SL8 496 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 ZBED2Q9BTP6 218 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 KIFC3Q9BVG8 833 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 FAM49AQ9H0Q0 323 aaPredicted RBP7.22□□□□□ -1.25
CD44-214ENST00000525211 WNT8AQ9H1J5 351 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 ADAMTS10Q9H324 1103 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 MINDY3Q9H8M7 445 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 SUGCTQ9HAC7 445 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 NRBP2Q9NSY0 501 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 ANKEF1Q9NU02 776 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms