RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 GTF2F1P35269 517 aaKnown RBP eCLIP14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 IRS1P35568 1242 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 PLA2G5P39877 138 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 GPC3P51654 580 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 CLCN3P51790 818 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 PRKCEQ02156 737 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 PAN2Q504Q3 1202 aaKnown RBP14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 PPP4R3AQ6IN85 833 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 TMEM184AQ6ZMB5 413 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 ZNF598Q86UK7 904 aaKnown RBP14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 POP1Q99575 1024 aaKnown RBP14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 IGFLR1Q9H665 355 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 RNF19AQ9NV58 838 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 AKT3Q9Y243 479 aa14.25□□□□□ -0.13
TOP1MT-217ENST00000523417 LINC01565O15544 149 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 DCXO43602 365 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 TBX10O75333 385 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 FGF18O76093 207 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 LAG3P18627 525 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 TBC1D8BQ0IIM8 1120 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 NONOQ15233 471 aaKnown RBP eCLIP14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 UGCGQ16739 394 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 LRRC55Q6ZSA7 311 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 EP400NLQ6ZTU2 488 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 MIER3Q7Z3K6 550 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 KRT25Q7Z3Z0 450 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 ADGRD2Q7Z7M1 963 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 ECHDC2Q86YB7 292 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 LRRC71Q8N4P6 559 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 COLGALT1Q8NBJ5 622 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 SMRP1Q8NCR6 262 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 FAM20AQ96MK3 541 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 PHF20Q9BVI0 1012 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 PDRG1Q9NUG6 133 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 NLRC5Q86WI3 1866 aa14.24□□□□□ -0.13
TOP1MT-217ENST00000523417 TBX3O15119 743 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 MAFO75444 373 aaPredicted RBP14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 CDKL5O76039 1030 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 DNM2P50570 870 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 ERVFC1P60507 584 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 KCNC3Q14003 757 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 TRMT1LQ7Z2T5 733 aaKnown RBP14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 EXOC8Q8IYI6 725 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 FAM122AQ96E09 287 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 TLE6Q9H808 572 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 KCNMB3Q9NPA1 279 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 TLR9Q9NR96 1032 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 DACT1Q9NYF0 836 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 PUF60Q9UHX1 559 aaKnown RBP14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 PPME1Q9Y570 386 aa14.23□□□□□ -0.13
TOP1MT-217ENST00000523417 STK36Q9NRP7 1315 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 CARNS1A5YM72 827 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 PFKFB2O60825 505 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 TDP2O95551 362 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 GLP2RO95838 553 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 FGFR1P11362 822 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 GCFC2P16383 781 aaKnown RBP14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 NRIP1P48552 1158 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 ANAPC15P60006 121 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 PSMC5P62195 406 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 PPP2R5CQ13362 524 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 CBX2Q14781 532 aaPredicted RBP14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 DUSP6Q16828 381 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 HERC4Q5GLZ8 1057 aaPredicted RBP14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 ZNF410Q86VK4 478 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 MRPS27Q92552 414 aaKnown RBP14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 GJA10Q969M2 543 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 NAP1L4Q99733 375 aaKnown RBP14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 JPH2Q9BR39 696 aaPredicted RBP14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 GCOM2Q9BZD3 368 aaPredicted RBP14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 INO80BQ9C086 356 aaPredicted RBP14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 NGRNQ9NPE2 291 aaKnown RBP14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 HCN4Q9Y3Q4 1203 aa14.22□□□□□ -0.13
TOP1MT-217ENST00000523417 LOC730098B7Z3J9 87 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 CHMP2AO43633 222 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 DKC1O60832 514 aaKnown RBP eCLIP14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 ZNF623O75123 536 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 ATF7P17544 494 aaPredicted RBP14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 XBP1P17861 261 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 PPM1AP35813 382 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 NDUFV1P49821 464 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 SCRN1Q12765 414 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 SPOUT1Q5T280 376 aaKnown RBP14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 KCNT2Q6UVM3 1135 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 ANO5Q75V66 913 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 THNSL1Q8IYQ7 743 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 LRRC43Q8N309 656 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 MICAL1Q8TDZ2 1067 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 SUSD6Q92537 303 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 AIFM3Q96NN9 605 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 PPP1R16BQ96T49 567 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 KCNH6Q9H252 994 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 SPG21Q9NZD8 308 aa14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 DDX25Q9UHL0 483 aaKnown RBP14.21□□□□□ -0.13
TOP1MT-217ENST00000523417 EVPLQ92817 2033 aa14.2□□□□□ -0.14
TOP1MT-217ENST00000523417 DDX11L8A8MPP1 907 aa14.2□□□□□ -0.14
TOP1MT-217ENST00000523417 P4HBP07237 508 aaKnown RBP14.2□□□□□ -0.14
TOP1MT-217ENST00000523417 SKIP12755 728 aa14.2□□□□□ -0.14
TOP1MT-217ENST00000523417 QARSP47897 775 aaKnown RBP14.2□□□□□ -0.14
TOP1MT-217ENST00000523417 KRT17Q04695 432 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms