RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	PIN1	Q13526	163 aa	Predicted RBP	6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	ZNF124	Q15973	351 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	UGT8	Q16880	541 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	LARP4	Q71RC2	724 aa	Known RBP eCLIP	6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	ZBTB46	Q86UZ6	589 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	TTLL6	Q8N841	843 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	OR5AN1	Q8NGI8	311 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	FERMT2	Q96AC1	680 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	E2F7	Q96AV8	911 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	TEKT5	Q96M29	485 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	ACAP3	Q96P50	834 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	SLC13A1	Q9BZW2	595 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	METTL14	Q9HCE5	456 aa	Known RBP	6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	AASDHPPT	Q9NRN7	309 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	DNAJC28	Q9NX36	388 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	ZIM2	Q9NZV7	527 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	DPP7	Q9UHL4	492 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	PRSS50	Q9UI38	385 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	PTPN22	Q9Y2R2	807 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	RNF114	Q9Y508	228 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	NUMBL	Q9Y6R0	609 aa		6.15	□□□□□ -1.42
CTNNA1-238	ENST00000523298	DDX3X	O00571	662 aa	Known RBP eCLIP	6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	FARP2	O94887	1054 aa	Predicted RBP	6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	EPHB1	P54762	984 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	TMEM200B	Q69YZ2	307 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	TIGD7	Q6NT04	549 aa	Predicted RBP	6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	FMNL3	Q8IVF7	1028 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CALML6	Q8TD86	181 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CDH19	Q9H159	772 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	MKS1	Q9NXB0	559 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CHPF2	Q9P2E5	772 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	IP6K2	Q9UHH9	426 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	SERPINB13	Q9UIV8	391 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	USP18	Q9UMW8	372 aa		6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	LUC7L2	Q9Y383	392 aa	Known RBP	6.14	□□□□□ -1.43
CTNNA1-238	ENST00000523298	NPIPB6	E9PJ23	425 aa		6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	TSPAN6	O43657	245 aa		6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	MAF	O75444	373 aa	Predicted RBP	6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	RPL13	P26373	211 aa	Known RBP	6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	FXR1	P51114	621 aa	Known RBP eCLIP	6.13	□□□□□ -1.43	8e-6	■■■□□ 16.4
CTNNA1-238	ENST00000523298	STAT5B	P51692	787 aa		6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	LINC00310	P59036	64 aa		6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	PPARA	Q07869	468 aa		6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	TOP3A	Q13472	1001 aa	Predicted RBP	6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	MUM1	Q2TAK8	710 aa		6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	WDR72	Q3MJ13	1102 aa		6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	TRMT10B	Q6PF06	316 aa	Known RBP	6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CMTR2	Q8IYT2	770 aa	Known RBP	6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	POU5F2	Q8N7G0	328 aa		6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	FTSJ1	Q9UET6	329 aa		6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CNOT6	Q9ULM6	557 aa	Known RBP	6.13	□□□□□ -1.43
CTNNA1-238	ENST00000523298	XPOT	O43592	962 aa	Known RBP	6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	TSPAN15	O95858	294 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CDK17	Q00537	523 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CLUL1	Q15846	466 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	GRAMD4	Q6IC98	578 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	TPH2	Q8IWU9	490 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CPA6	Q8N4T0	437 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	NKD2	Q969F2	451 aa	Predicted RBP	6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	YTHDC1	Q96MU7	727 aa	Known RBP	6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	FMNL2	Q96PY5	1086 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	NOL10	Q9BSC4	688 aa	Known RBP	6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	KRTAP4-8	Q9BYQ9	185 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	PCDH18	Q9HCL0	1135 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	DMRT3	Q9NQL9	472 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	KCMF1	Q9P0J7	381 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	DNAI1	Q9UI46	699 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	GPR45	Q9Y5Y3	372 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CDY2A	Q9Y6F7	541 aa		6.12	□□□□□ -1.43
CTNNA1-238	ENST00000523298	SH3D21	A4FU49	640 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	TCAF2	A6NFQ2	919 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298		H0Y858	1186 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	SEC24D	O94855	1032 aa	Predicted RBP	6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	HMGB1	P09429	215 aa	Known RBP	6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	ZNF888	P0CJ79	500 aa	Predicted RBP	6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	HNRNPL	P14866	589 aa	Known RBP eCLIP	6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	ZSCAN20	P17040	1043 aa	Predicted RBP	6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	BCAR1	P56945	870 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	KRT85	P78386	507 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	MRPS9	P82933	396 aa	Known RBP	6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	NFATC3	Q12968	1075 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	EIF4H	Q15056	248 aa	Known RBP	6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	KCNA10	Q16322	511 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CXXC5	Q7LFL8	322 aa	Known RBP	6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	PPP1R14C	Q8TAE6	165 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	GAB3	Q8WWW8	586 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	MBD6	Q96DN6	1003 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	KIAA1683	Q9H0B3	1180 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	SCOC	Q9UIL1	159 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	NOB1	Q9ULX3	412 aa	Known RBP	6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	SPEF1	Q9Y4P9	236 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298	PCDHB6	Q9Y5E3	794 aa		6.11	□□□□□ -1.43
CTNNA1-238	ENST00000523298		A0A0G2JNJ9	132 aa		6.1	□□□□□ -1.43
CTNNA1-238	ENST00000523298	KLHL33	A6NCF5	533 aa		6.1	□□□□□ -1.43
CTNNA1-238	ENST00000523298	TMEM127	O75204	238 aa		6.1	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CFB	P00751	764 aa		6.1	□□□□□ -1.43
CTNNA1-238	ENST00000523298	KCNQ1	P51787	676 aa		6.1	□□□□□ -1.43
CTNNA1-238	ENST00000523298	CD69	Q07108	199 aa		6.1	□□□□□ -1.43
CTNNA1-238	ENST00000523298	ACAP1	Q15027	740 aa		6.1	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms