RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 DMXL2Q8TDJ6 3036 aa10.32□□□□□ -0.76
TRAPPC9-212ENST00000521944 SPATA31C2B4DYI2 1134 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 PPP1R11O60927 126 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 FGFR1P11362 822 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 EPCAMP16422 314 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 IBSPP21815 317 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 HOXA13P31271 388 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 MRPS9P82933 396 aaKnown RBP10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 LMNB2Q03252 620 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 TMEM62Q0P6H9 643 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 TMEM266Q2M3C6 531 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 SPOUT1Q5T280 376 aaKnown RBP10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 VPS53Q5VIR6 699 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 FAM160A2Q8N612 972 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 RNF19AQ9NV58 838 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 TUBE1Q9UJT0 475 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 CCDC171Q6TFL3 1326 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 IGSF9BQ9UPX0 1349 aa10.31□□□□□ -0.76
TRAPPC9-212ENST00000521944 NAV2Q8IVL1 2488 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 C9IYK1 514 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 NOP56O00567 594 aaKnown RBP10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 KINO60870 393 aaKnown RBP10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 ZFYP08048 801 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 GRIK4Q16099 956 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 TUSC1Q2TAM9 212 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 ZMYM1Q5SVZ6 1142 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 TMC5Q6UXY8 1006 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 TMC7Q7Z402 723 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 GPR161Q8N6U8 529 aaKnown RBP10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 SLC22A17Q8WUG5 538 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 JMJD4Q9H9V9 463 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 ECHDC1Q9NTX5 307 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 NCDNQ9UBB6 729 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 LRFN2Q9ULH4 789 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 CA14Q9ULX7 337 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 PCDHGC3Q9UN70 934 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 MRPL11Q9Y3B7 192 aaKnown RBP10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 SIT1Q9Y3P8 196 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 PCDHB7Q9Y5E2 793 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 V9GY48 417 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 LOC400499M0QZD8 3231 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 DOCK8Q8NF50 2099 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 BPTFQ12830 3046 aa10.3□□□□□ -0.76
TRAPPC9-212ENST00000521944 PMLP29590 882 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 FAM189BP81408 668 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 PPFIA1Q13136 1202 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 GPATCH4Q5T3I0 446 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 PHLDB3Q6NSJ2 640 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 XRRA1Q6P2D8 792 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 KCNT2Q6UVM3 1135 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 GPR149Q86SP6 731 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 RSPH3Q86UC2 560 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 FTSJ3Q8IY81 847 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 SLC44A3Q8N4M1 653 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 ZBTB44Q8NCP5 570 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 PANK1Q8TE04 598 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 NELL1Q92832 810 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 CASD1Q96PB1 797 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 INPP4AQ96PE3 977 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 FOXQ1Q9C009 403 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 FAM117AQ9C073 453 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 FAM49AQ9H0Q0 323 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 PUF60Q9UHX1 559 aaKnown RBP10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 ZNF215Q9UL58 517 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 AKAP13Q12802 2813 aa10.29□□□□□ -0.76
TRAPPC9-212ENST00000521944 COL4A3Q01955 1670 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 LAMA5O15230 3695 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 ITPR1Q14643 2758 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 SLC30A4O14863 429 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 LILRB5O75023 590 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 LAG3P18627 525 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 MARK3P27448 753 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 CLK2P49760 499 aaKnown RBP10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 MMP16P51512 607 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 SP4Q02446 784 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 PAK2Q13177 524 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 ZNF528Q3MIS6 628 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 RRP12Q5JTH9 1297 aaKnown RBP10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 OTOP3Q7RTS5 596 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 TMEM40Q8WWA1 233 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 AUTS2Q8WXX7 1259 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 ACSF2Q96CM8 615 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 TTC14Q96N46 770 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 ADAM2Q99965 735 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 CELF4Q9BZC1 486 aaKnown RBP10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 PRKD2Q9BZL6 878 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 EPC1Q9H2F5 836 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 RGS18Q9NS28 235 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 RTEL1Q9NZ71 1219 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 IGSF9Q9P2J2 1179 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 TRPV2Q9Y5S1 764 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 C2orf16Q68DN1 1984 aa10.28□□□□□ -0.76
TRAPPC9-212ENST00000521944 SDK1Q7Z5N4 2213 aa10.27□□□□□ -0.76
TRAPPC9-212ENST00000521944 GSTTP1A0A1W2PQM5 241 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 DXOO77932 396 aaKnown RBP10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 CCND2P30279 289 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 SHC2P98077 582 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 NEDD9Q14511 834 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 SMC1AQ14683 1233 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms