RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 GTPBP6O43824 516 aaPredicted RBP15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 LYPLA2O95372 231 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 OR52Z1P0C646 297 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 LINC00271P0C7V0 271 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 TECP42680 631 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 SARSP49591 514 aaKnown RBP15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 GATMP50440 423 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 DNM2P50570 870 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 EPC2Q52LR7 807 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 XKR9Q5GH70 373 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 ODR4Q5SWX8 454 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 OTUD6AQ7L8S5 288 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 RHPN2Q8IUC4 686 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 C4orf32Q8N8J7 132 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 FBXO22Q8NEZ5 403 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 TMEM143Q96AN5 459 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 ZNF689Q96CS4 500 aaPredicted RBP15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 JPH2Q9BR39 696 aaPredicted RBP15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 BMP2KQ9NSY1 1161 aaPredicted RBP15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 NOL7Q9UMY1 257 aaKnown RBP15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 TRANK1O15050 2925 aa15.76■□□□□ 0.11
PDGFRB-202ENST00000517488 ADGRA3Q8IWK6 1321 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 A0A087WZ62 844 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 STAG3L1P0CL83 205 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 SPATA31C1P0DKV0 1188 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 RFC5P40937 340 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 POLGP54098 1239 aaPredicted RBP15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 ORC2Q13416 577 aaPredicted RBP15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 BTG3Q14201 252 aaPredicted RBP15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 MCTP1Q6DN14 999 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 SLC24A5Q71RS6 500 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 TMEM192Q8IY95 271 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 FIBCD1Q8N539 461 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 NEK9Q8TD19 979 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 SLC7A3Q8WY07 619 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 FDXACB1Q9BRP7 624 aaPredicted RBP15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 GCOM2Q9BZD3 368 aaPredicted RBP15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 C1orf112Q9NSG2 853 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 SMC3Q9UQE7 1217 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 PPME1Q9Y570 386 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 PCDHB6Q9Y5E3 794 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 TTC3P53804 2025 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 EVPLQ92817 2033 aa15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 PRRC2BQ5JSZ5 2229 aaKnown RBP15.75■□□□□ 0.11
PDGFRB-202ENST00000517488 VCANP13611 3396 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 FAM189BP81408 668 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 CDC42EP1Q00587 391 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 EMC2Q15006 297 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 PAN2Q504Q3 1202 aaKnown RBP15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 FAM43BQ6ZT52 329 aaPredicted RBP15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 PIGOQ8TEQ8 1089 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 PRPF31Q8WWY3 499 aaKnown RBP15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 NLRP4Q96MN2 994 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 SAMD11Q96NU1 681 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 XPNPEP1Q9NQW7 623 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 ANKEF1Q9NU02 776 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 LRFN2Q9ULH4 789 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 PCDHB7Q9Y5E2 793 aa15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 MRPL42Q9Y6G3 142 aaKnown RBP15.74■□□□□ 0.11
PDGFRB-202ENST00000517488 H3BQV1 296 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 MED24O75448 989 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 CTNNB1P35222 781 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 PTGDRQ13258 359 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 CUL4AQ13619 759 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 FAM102BQ5T8I3 360 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 ZNF410Q86VK4 478 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 CATSPER3Q86XQ3 398 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 EXOC8Q8IYI6 725 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 CMTR2Q8IYT2 770 aaKnown RBP15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 PSPC1Q8WXF1 523 aaKnown RBP15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 CLP1Q92989 425 aaKnown RBP15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 COL4A3BPQ9Y5P4 624 aa15.73■□□□□ 0.11
PDGFRB-202ENST00000517488 WDR81Q562E7 1941 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 SRGAP2CP0DJJ0 459 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 ZSCAN20P17040 1043 aaPredicted RBP15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 BMPR1AP36894 532 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 RARRES1P49788 294 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 LAMTOR4Q0VGL1 99 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 GPM6BQ13491 265 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 POLR3CQ9BUI4 534 aaPredicted RBP15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 IFT122Q9HBG6 1241 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 TUFT1Q9NNX1 390 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 LMCD1Q9NZU5 365 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 COL4A6Q14031 1691 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 REV3LO60673 3130 aa15.72■□□□□ 0.11
PDGFRB-202ENST00000517488 TBKBP1A7MCY6 615 aa15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 H3BNC9 293 aa15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 GAS2O43903 313 aaKnown RBP15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 FGFR1P11362 822 aa15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 XRCC6P12956 609 aaKnown RBP eCLIP15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 POTEGQ6S5H5 508 aa15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 FERMT3Q86UX7 667 aa15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 MTRQ99707 1265 aa15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 MINDY3Q9H8M7 445 aa15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 ATP6V0A4Q9HBG4 840 aa15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 RNF19AQ9NV58 838 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms