RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 AGO3Q9H9G7 860 aaKnown RBP28.89■■■□□ 2.22
DDR1-279ENST00000515529 PADI3Q9ULW8 664 aa28.89■■■□□ 2.22
DDR1-279ENST00000515529 COL4A3BPQ9Y5P4 624 aa28.89■■■□□ 2.22
DDR1-279ENST00000515529 SOX1O00570 391 aaPredicted RBP28.88■■■□□ 2.21
DDR1-279ENST00000515529 GPR182O15218 404 aa28.88■■■□□ 2.21
DDR1-279ENST00000515529 SLC26A4O43511 780 aa28.88■■■□□ 2.21
DDR1-279ENST00000515529 NASPP49321 788 aaPredicted RBP28.88■■■□□ 2.21
DDR1-279ENST00000515529 PADI6Q6TGC4 694 aa28.88■■■□□ 2.21
DDR1-279ENST00000515529 MCPH1Q8NEM0 835 aa28.88■■■□□ 2.21
DDR1-279ENST00000515529 PHOSPHO2Q8TCD6 241 aa28.88■■■□□ 2.21
DDR1-279ENST00000515529 FTHL17Q9BXU8 183 aa28.88■■■□□ 2.21
DDR1-279ENST00000515529 BHMT2Q9H2M3 363 aa28.88■■■□□ 2.21
DDR1-279ENST00000515529 TFIP11Q9UBB9 837 aaKnown RBP28.88■■■□□ 2.21
DDR1-279ENST00000515529 NOC2LQ9Y3T9 749 aaKnown RBP28.88■■■□□ 2.21
DDR1-279ENST00000515529 ARID2Q68CP9 1835 aa28.87■■■□□ 2.21
DDR1-279ENST00000515529 ASAP2O43150 1006 aa28.87■■■□□ 2.21
DDR1-279ENST00000515529 EIF4BP23588 611 aaKnown RBP28.87■■■□□ 2.21
DDR1-279ENST00000515529 FXR1P51114 621 aaKnown RBP eCLIP28.87■■■□□ 2.21
DDR1-279ENST00000515529 ATL3Q6DD88 541 aa28.87■■■□□ 2.21
DDR1-279ENST00000515529 KCTD17Q8N5Z5 321 aa28.87■■■□□ 2.21
DDR1-279ENST00000515529 KRI1Q8N9T8 703 aaKnown RBP28.87■■■□□ 2.21
DDR1-279ENST00000515529 TMEM40Q8WWA1 233 aa28.87■■■□□ 2.21
DDR1-279ENST00000515529 PRPF31Q8WWY3 499 aaKnown RBP28.87■■■□□ 2.21
DDR1-279ENST00000515529 INO80BQ9C086 356 aaPredicted RBP28.87■■■□□ 2.21
DDR1-279ENST00000515529 SRPRBQ9Y5M8 271 aaKnown RBP28.87■■■□□ 2.21
DDR1-279ENST00000515529 SIP14410 1827 aa28.87■■■□□ 2.21
DDR1-279ENST00000515529 EYA4O95677 639 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 BRD1O95696 1058 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 ANP32AP39687 249 aaKnown RBP28.86■■■□□ 2.21
DDR1-279ENST00000515529 TXLNAP40222 546 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 MXD4Q14582 209 aaPredicted RBP28.86■■■□□ 2.21
DDR1-279ENST00000515529 FAM109BQ6ICB4 259 aaPredicted RBP28.86■■■□□ 2.21
DDR1-279ENST00000515529 FAM43BQ6ZT52 329 aaPredicted RBP28.86■■■□□ 2.21
DDR1-279ENST00000515529 LRCH3Q96II8 777 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 PLIN2Q99541 437 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 ZBED2Q9BTP6 218 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 CSRNP2Q9H175 543 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 XPNPEP1Q9NQW7 623 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 MSRAQ9UJ68 235 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 FBXO2Q9UK22 296 aaPredicted RBP28.86■■■□□ 2.21
DDR1-279ENST00000515529 CFAP45Q9UL16 551 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 ST3GAL5Q9UNP4 418 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 ATP6V1DQ9Y5K8 247 aa28.86■■■□□ 2.21
DDR1-279ENST00000515529 MORC2Q9Y6X9 1032 aaPredicted RBP28.86■■■□□ 2.21
DDR1-279ENST00000515529 A0A087WZ62 844 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 GRXCR1A8MXD5 290 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 E9PMD0 336 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 SPTLC2O15270 562 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 YEATS4O95619 227 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 SRGAP2CP0DJJ0 459 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 DARSP14868 501 aaKnown RBP28.85■■■□□ 2.21
DDR1-279ENST00000515529 GRIN1Q05586 938 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 LAMTOR4Q0VGL1 99 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 TFDP1Q14186 410 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 RAB30Q15771 203 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 HYIQ5T013 277 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 MAEAQ7L5Y9 396 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 MYOCDQ8IZQ8 938 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 LINC00301Q8NCQ3 95 aa28.85■■■□□ 2.21
DDR1-279ENST00000515529 FDXACB1Q9BRP7 624 aaPredicted RBP28.85■■■□□ 2.21
DDR1-279ENST00000515529 POLR3FQ9H1D9 316 aaPredicted RBP28.85■■■□□ 2.21
DDR1-279ENST00000515529 DEFB103AP81534 67 aa28.84■■■□□ 2.21
DDR1-279ENST00000515529 FAM102BQ5T8I3 360 aa28.84■■■□□ 2.21
DDR1-279ENST00000515529 FAM228AQ86W67 206 aa28.84■■■□□ 2.21
DDR1-279ENST00000515529 KSR1Q8IVT5 923 aa28.84■■■□□ 2.21
DDR1-279ENST00000515529 HERC6Q8IVU3 1022 aa28.84■■■□□ 2.21
DDR1-279ENST00000515529 ERVK-5Q9HDB9 667 aa28.84■■■□□ 2.21
DDR1-279ENST00000515529 MYH15Q9Y2K3 1946 aa28.83■■■□□ 2.21
DDR1-279ENST00000515529 DENND3A2RUS2 1198 aa28.83■■■□□ 2.21
DDR1-279ENST00000515529 RBAK-RBAKDNI3L0D1 243 aa28.83■■■□□ 2.21
DDR1-279ENST00000515529 SSBP05455 408 aaKnown RBP eCLIP28.83■■■□□ 2.21
DDR1-279ENST00000515529 CYP11B2P19099 503 aa28.83■■■□□ 2.21
DDR1-279ENST00000515529 SFPQP23246 707 aaKnown RBP eCLIP28.83■■■□□ 2.21
DDR1-279ENST00000515529 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.83■■■□□ 2.21
DDR1-279ENST00000515529 PNMA5Q96PV4 448 aa28.83■■■□□ 2.21
DDR1-279ENST00000515529 NCLP19338 710 aaKnown RBP28.82■■■□□ 2.2
DDR1-279ENST00000515529 PHKA2P46019 1235 aa28.82■■■□□ 2.2
DDR1-279ENST00000515529 GRB10Q13322 594 aa28.82■■■□□ 2.2
DDR1-279ENST00000515529 TMEM119Q4V9L6 283 aa28.82■■■□□ 2.2
DDR1-279ENST00000515529 SPECC1Q5M775 1068 aa28.82■■■□□ 2.2
DDR1-279ENST00000515529 RNF149Q8NC42 400 aa28.82■■■□□ 2.2
DDR1-279ENST00000515529 CLIC6Q96NY7 704 aa28.82■■■□□ 2.2
DDR1-279ENST00000515529 CCDC39Q9UFE4 941 aa28.82■■■□□ 2.2
DDR1-279ENST00000515529 PPP6R2O75170 966 aa28.81■■■□□ 2.2
DDR1-279ENST00000515529 DNAJB2P25686 324 aa28.81■■■□□ 2.2
DDR1-279ENST00000515529 RABGGTBP53611 331 aa28.81■■■□□ 2.2
DDR1-279ENST00000515529 DNM1Q05193 864 aaKnown RBP28.81■■■□□ 2.2
DDR1-279ENST00000515529 FAM117BQ6P1L5 589 aa28.81■■■□□ 2.2
DDR1-279ENST00000515529 KCNG4Q8TDN1 519 aa28.81■■■□□ 2.2
DDR1-279ENST00000515529 PBX4Q9BYU1 374 aa28.81■■■□□ 2.2
DDR1-279ENST00000515529 CCSER1Q9C0I3 900 aa28.81■■■□□ 2.2
DDR1-279ENST00000515529 PCDHA11Q9Y5I1 949 aa28.81■■■□□ 2.2
DDR1-279ENST00000515529 LOXHD1Q8IVV2 1947 aa28.81■■■□□ 2.2
DDR1-279ENST00000515529 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.8■■■□□ 2.2
DDR1-279ENST00000515529 ENPP3O14638 875 aa28.8■■■□□ 2.2
DDR1-279ENST00000515529 TLL1O43897 1013 aa28.8■■■□□ 2.2
DDR1-279ENST00000515529 ZSCAN20P17040 1043 aaPredicted RBP28.8■■■□□ 2.2
DDR1-279ENST00000515529 ARL2P36404 184 aa28.8■■■□□ 2.2
DDR1-279ENST00000515529 KARSQ15046 597 aaKnown RBP28.8■■■□□ 2.2
DDR1-279ENST00000515529 GPR153Q6NV75 609 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms