RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 DGAT1O75907 488 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 C22orf31O95567 290 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 CD4P01730 458 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 PFKFB1P16118 471 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 KLRC1P26715 233 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 RFC5P40937 340 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 POLGP54098 1239 aaPredicted RBP8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 NPEPPSP55786 919 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 HIC1Q14526 733 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 EMC2Q15006 297 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 PTGISQ16647 500 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 NAALADL2Q58DX5 795 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 RRAGBQ5VZM2 374 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 MTHFD1LQ6UB35 978 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 KCNK18Q7Z418 384 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 SERINC5Q86VE9 423 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 FSIP1Q8NA03 581 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 RETREG2Q8NC44 543 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 PPP1R13LQ8WUF5 828 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 TRAPPC12Q8WVT3 735 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 SLC7A3Q8WY07 619 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 RAD54LQ92698 747 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 CEP89Q96ST8 783 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 PLIN2Q99541 437 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 MTRQ99707 1265 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 SH2D3AQ9BRG2 576 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 BHMT2Q9H2M3 363 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 DHX33Q9H6R0 707 aaKnown RBP8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 MAGEF1Q9HAY2 307 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 ATP6V0A4Q9HBG4 840 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 TRMT13Q9NUP7 481 aaKnown RBP8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 KCND2Q9NZV8 630 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 KCNH3Q9ULD8 1083 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 HPSEQ9Y251 543 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 ATP11BQ9Y2G3 1177 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 GBF1Q92538 1859 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 PTPRSQ13332 1948 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 PDCD11Q14690 1871 aaKnown RBP8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 TDRD15B5MCY1 1934 aaKnown RBP8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 A0A087X0B3 334 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 IGKV6-21A0A0C4DH24 114 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 ZBTB39O15060 712 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 POLR2DO15514 142 aaKnown RBP8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 USO1O60763 962 aaKnown RBP8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 CAND2O75155 1236 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 CLTBP09497 229 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 PLA2G4BP0C869 781 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 CYP2C9P11712 490 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 TMOD1P28289 359 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 SYKP43405 635 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 SLC12A3P55017 1021 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 UBE2HP62256 183 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 ZNF200P98182 395 aaPredicted RBP8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 TLE2Q04725 743 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 RBL2Q08999 1139 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 PTK7Q13308 1070 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 MARCH8Q5T0T0 291 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 PADI6Q6TGC4 694 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 RPAINQ86UA6 219 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 CCDC155Q8N6L0 562 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 METTL13Q8N6R0 699 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 LINC01465Q8N7H1 131 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 SYT2Q8N9I0 419 aaPredicted RBP8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 IQUBQ8NA54 791 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 MCPH1Q8NEM0 835 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 CAGE1Q8TC20 777 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 LRRC15Q8TF66 581 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 DHX58Q96C10 678 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 CTAGE1Q96RT6 745 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 MAP7D2Q96T17 732 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 ZBED2Q9BTP6 218 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 TIPINQ9BVW5 301 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 TRPV6Q9H1D0 765 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 TNMDQ9H2S6 317 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 BLOC1S4Q9NUP1 217 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 USP25Q9UHP3 1055 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 PCDHA2Q9Y5H9 948 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 CEP290O15078 2479 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 ANK1P16157 1881 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 RALGAPA2Q2PPJ7 1873 aa8.43□□□□□ -1.06
HMGXB3-204ENST00000513318 A0A087WWV3 80 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 PRPF40AO75400 957 aaKnown RBP8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 SSBP05455 408 aaKnown RBP eCLIP8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 CYP11B2P19099 503 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 DNM2P50570 870 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 CLCN3P51790 818 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 NDUFA8P51970 172 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 FAM160A1Q05DH4 1040 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 FAAP100Q0VG06 881 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 BFSP2Q13515 415 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 MCM6Q14566 821 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 TPRNQ4KMQ1 711 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 IER5Q5VY09 327 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 RINT1Q6NUQ1 792 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 EFCAB12Q6NXP0 572 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 SV2BQ7L1I2 683 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 RSPH3Q86UC2 560 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 GPBP1Q86WP2 473 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 CEP57L1Q8IYX8 460 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 TCP11Q8WWU5 503 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms