RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ZNF689Q96CS4 500 aaPredicted RBP18.46■□□□□ 0.55
DDX41-213ENST00000512027 BACH2Q9BYV9 841 aa18.46■□□□□ 0.55
DDX41-213ENST00000512027 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.55
DDX41-213ENST00000512027 VCANP13611 3396 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 A0A087WZ62 844 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 GPR182O15218 404 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 GTPBP6O43824 516 aaPredicted RBP18.45■□□□□ 0.54
DDX41-213ENST00000512027 DGKIO75912 1065 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 LINC00271P0C7V0 271 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 DARSP14868 501 aaKnown RBP18.45■□□□□ 0.54
DDX41-213ENST00000512027 EIF4BP23588 611 aaKnown RBP18.45■□□□□ 0.54
DDX41-213ENST00000512027 XKR9Q5GH70 373 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 RHPN2Q8IUC4 686 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 TMEM192Q8IY95 271 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 TMEM143Q96AN5 459 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 FDXACB1Q9BRP7 624 aaPredicted RBP18.45■□□□□ 0.54
DDX41-213ENST00000512027 ZSWIM4Q9H7M6 989 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 SUCLA2Q9P2R7 463 aaPredicted RBP18.45■□□□□ 0.54
DDX41-213ENST00000512027 XIRP2A4UGR9 3374 aa18.45■□□□□ 0.54
DDX41-213ENST00000512027 DKC1O60832 514 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDX41-213ENST00000512027 OR52Z1P0C646 297 aa18.44■□□□□ 0.54
DDX41-213ENST00000512027 U2AF2P26368 475 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDX41-213ENST00000512027 CTNNB1P35222 781 aa18.44■□□□□ 0.54
DDX41-213ENST00000512027 TECP42680 631 aa18.44■□□□□ 0.54
DDX41-213ENST00000512027 SARSP49591 514 aaKnown RBP18.44■□□□□ 0.54
DDX41-213ENST00000512027 TOB1P50616 345 aaPredicted RBP18.44■□□□□ 0.54
DDX41-213ENST00000512027 POLGP54098 1239 aaPredicted RBP18.44■□□□□ 0.54
DDX41-213ENST00000512027 BTG3Q14201 252 aaPredicted RBP18.44■□□□□ 0.54
DDX41-213ENST00000512027 DSC3Q14574 896 aa18.44■□□□□ 0.54
DDX41-213ENST00000512027 NLRP4Q96MN2 994 aa18.44■□□□□ 0.54
DDX41-213ENST00000512027 HSD17B14Q9BPX1 270 aa18.44■□□□□ 0.54
DDX41-213ENST00000512027 RGS18Q9NS28 235 aa18.44■□□□□ 0.54
DDX41-213ENST00000512027 C9IYK1 514 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 POU3F3P20264 500 aaPredicted RBP18.43■□□□□ 0.54
DDX41-213ENST00000512027 DNM2P50570 870 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 EMC2Q15006 297 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 FAM102BQ5T8I3 360 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 MCTP1Q6DN14 999 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 PIGOQ8TEQ8 1089 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 SLC7A3Q8WY07 619 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 DHX33Q9H6R0 707 aaKnown RBP18.43■□□□□ 0.54
DDX41-213ENST00000512027 HCSTQ9UBK5 93 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 LRFN2Q9ULH4 789 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 NOL7Q9UMY1 257 aaKnown RBP18.43■□□□□ 0.54
DDX41-213ENST00000512027 PCDHB6Q9Y5E3 794 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 MRPL42Q9Y6G3 142 aaKnown RBP18.43■□□□□ 0.54
DDX41-213ENST00000512027 CUL9Q8IWT3 2517 aa18.43■□□□□ 0.54
DDX41-213ENST00000512027 PLXNA4Q9HCM2 1894 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 MED24O75448 989 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 CSPG5O95196 566 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 STAG3L1P0CL83 205 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 FGFR1P11362 822 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 GPM6BQ13491 265 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 SKIV2LQ15477 1246 aaKnown RBP18.42■□□□□ 0.54
DDX41-213ENST00000512027 ODR4Q5SWX8 454 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 SLC24A5Q71RS6 500 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 C4orf32Q8N8J7 132 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 GCOM2Q9BZD3 368 aaPredicted RBP18.42■□□□□ 0.54
DDX41-213ENST00000512027 XPNPEP1Q9NQW7 623 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 COL4A3BPQ9Y5P4 624 aa18.42■□□□□ 0.54
DDX41-213ENST00000512027 SPATA31C1P0DKV0 1188 aa18.41■□□□□ 0.54
DDX41-213ENST00000512027 RFC5P40937 340 aa18.41■□□□□ 0.54
DDX41-213ENST00000512027 MCM2P49736 904 aa18.41■□□□□ 0.54
DDX41-213ENST00000512027 OTUD6AQ7L8S5 288 aa18.41■□□□□ 0.54
DDX41-213ENST00000512027 NEK9Q8TD19 979 aa18.41■□□□□ 0.54
DDX41-213ENST00000512027 PRPF31Q8WWY3 499 aaKnown RBP18.41■□□□□ 0.54
DDX41-213ENST00000512027 SAMD11Q96NU1 681 aa18.41■□□□□ 0.54
DDX41-213ENST00000512027 JPH2Q9BR39 696 aaPredicted RBP18.41■□□□□ 0.54
DDX41-213ENST00000512027 C1orf112Q9NSG2 853 aa18.41■□□□□ 0.54
DDX41-213ENST00000512027 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
DDX41-213ENST00000512027 PCDHB7Q9Y5E2 793 aa18.41■□□□□ 0.54
DDX41-213ENST00000512027 MYO7AQ13402 2215 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 TBKBP1A7MCY6 615 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 H3BNC9 293 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 LYPLA2O95372 231 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 SRGAP2CP0DJJ0 459 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 TRAPPC10P48553 1259 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 TFF2Q03403 129 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 POTEGQ6S5H5 508 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 CATSPER3Q86XQ3 398 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 CMTR2Q8IYT2 770 aaKnown RBP18.4■□□□□ 0.54
DDX41-213ENST00000512027 RNF169Q8NCN4 708 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 MTRQ99707 1265 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 MINDY3Q9H8M7 445 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 IFT122Q9HBG6 1241 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 THEGQ9P2T0 379 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 KIF3AQ9Y496 699 aa18.4■□□□□ 0.54
DDX41-213ENST00000512027 H3BQV1 296 aa18.39■□□□□ 0.53
DDX41-213ENST00000512027 ZSCAN20P17040 1043 aaPredicted RBP18.39■□□□□ 0.53
DDX41-213ENST00000512027 BMPR1AP36894 532 aa18.39■□□□□ 0.53
DDX41-213ENST00000512027 RARRES1P49788 294 aa18.39■□□□□ 0.53
DDX41-213ENST00000512027 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
DDX41-213ENST00000512027 PTGDRQ13258 359 aa18.39■□□□□ 0.53
DDX41-213ENST00000512027 ORC2Q13416 577 aaPredicted RBP18.39■□□□□ 0.53
DDX41-213ENST00000512027 ZNF410Q86VK4 478 aa18.39■□□□□ 0.53
DDX41-213ENST00000512027 PSPC1Q8WXF1 523 aaKnown RBP18.39■□□□□ 0.53
DDX41-213ENST00000512027 CLP1Q92989 425 aaKnown RBP18.39■□□□□ 0.53
DDX41-213ENST00000512027 RNF19AQ9NV58 838 aa18.39■□□□□ 0.53
DDX41-213ENST00000512027 BRWD1Q9NSI6 2320 aa18.39■□□□□ 0.53
DDX41-213ENST00000512027 GRM6O15303 877 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms