RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 NPAS4Q8IUM7 802 aa14.88□□□□□ -0.03
RNF4-215ENST00000511843 NOSTRINQ8IVI9 506 aa14.88□□□□□ -0.03
RNF4-215ENST00000511843 TMEM192Q8IY95 271 aa14.88□□□□□ -0.03
RNF4-215ENST00000511843 ZNF689Q96CS4 500 aaPredicted RBP14.88□□□□□ -0.03
RNF4-215ENST00000511843 CEP170P1Q96L14 293 aa14.88□□□□□ -0.03
RNF4-215ENST00000511843 FDXACB1Q9BRP7 624 aaPredicted RBP14.88□□□□□ -0.03
RNF4-215ENST00000511843 FOXP1Q9H334 677 aaPredicted RBP14.88□□□□□ -0.03
RNF4-215ENST00000511843 SUCLA2Q9P2R7 463 aaPredicted RBP14.88□□□□□ -0.03
RNF4-215ENST00000511843 LRFN2Q9ULH4 789 aa14.88□□□□□ -0.03
RNF4-215ENST00000511843 MYO7AQ13402 2215 aa14.88□□□□□ -0.03
RNF4-215ENST00000511843 C9IYK1 514 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 SLITRK3O94933 977 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 CSPG5O95196 566 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 DARSP14868 501 aaKnown RBP14.87□□□□□ -0.03
RNF4-215ENST00000511843 POU3F3P20264 500 aaPredicted RBP14.87□□□□□ -0.03
RNF4-215ENST00000511843 EIF4BP23588 611 aaKnown RBP14.87□□□□□ -0.03
RNF4-215ENST00000511843 YWHABP31946 246 aaKnown RBP14.87□□□□□ -0.03
RNF4-215ENST00000511843 SARSP49591 514 aaKnown RBP14.87□□□□□ -0.03
RNF4-215ENST00000511843 POLGP54098 1239 aaPredicted RBP14.87□□□□□ -0.03
RNF4-215ENST00000511843 DSC3Q14574 896 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 XKR9Q5GH70 373 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 TTC38Q5R3I4 469 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 RHPN2Q8IUC4 686 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 C4orf19Q8IY42 314 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 TMEM143Q96AN5 459 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 NLRP4Q96MN2 994 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 RGS18Q9NS28 235 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 HCSTQ9UBK5 93 aa14.87□□□□□ -0.03
RNF4-215ENST00000511843 MRPL42Q9Y6G3 142 aaKnown RBP14.87□□□□□ -0.03
RNF4-215ENST00000511843 DLL1O00548 723 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 DKC1O60832 514 aaKnown RBP eCLIP14.86□□□□□ -0.03
RNF4-215ENST00000511843 STAG3L1P0CL83 205 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 FGFR1P11362 822 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 GJB2P29033 226 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 TECP42680 631 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 DNM2P50570 870 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 TFF2Q03403 129 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 GPM6BQ13491 265 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 FAM102BQ5T8I3 360 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 ZSWIM4Q9H7M6 989 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 THEGQ9P2T0 379 aa14.86□□□□□ -0.03
RNF4-215ENST00000511843 XIRP2A4UGR9 3374 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 OR52Z1P0C646 297 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 TOB1P50616 345 aaPredicted RBP14.85□□□□□ -0.03
RNF4-215ENST00000511843 EMC2Q15006 297 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 ODR4Q5SWX8 454 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 MCTP1Q6DN14 999 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 SLC24A5Q71RS6 500 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 PIGOQ8TEQ8 1089 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 SLC7A3Q8WY07 619 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 HSD17B14Q9BPX1 270 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 COL25A1Q9BXS0 654 aaPredicted RBP14.85□□□□□ -0.03
RNF4-215ENST00000511843 GCOM2Q9BZD3 368 aaPredicted RBP14.85□□□□□ -0.03
RNF4-215ENST00000511843 DHX33Q9H6R0 707 aaKnown RBP14.85□□□□□ -0.03
RNF4-215ENST00000511843 C1orf112Q9NSG2 853 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 PCDHB7Q9Y5E2 793 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 PCDHB6Q9Y5E3 794 aa14.85□□□□□ -0.03
RNF4-215ENST00000511843 TBKBP1A7MCY6 615 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 H3BNC9 293 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 MED24O75448 989 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 SPATA31C1P0DKV0 1188 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 U2AF2P26368 475 aaKnown RBP eCLIP14.84□□□□□ -0.036e-8■□□□□ 9.9
RNF4-215ENST00000511843 BMPR1AP36894 532 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 OTUD6AQ7L8S5 288 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 CMTR2Q8IYT2 770 aaKnown RBP14.84□□□□□ -0.03
RNF4-215ENST00000511843 RNF169Q8NCN4 708 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 PRPF31Q8WWY3 499 aaKnown RBP14.84□□□□□ -0.03
RNF4-215ENST00000511843 SAMD11Q96NU1 681 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 BACH2Q9BYV9 841 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 XPNPEP1Q9NQW7 623 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 RNF19AQ9NV58 838 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 NOL7Q9UMY1 257 aaKnown RBP14.84□□□□□ -0.03
RNF4-215ENST00000511843 COL4A3BPQ9Y5P4 624 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 BRWD1Q9NSI6 2320 aa14.84□□□□□ -0.03
RNF4-215ENST00000511843 GRM6O15303 877 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 SRGAP2CP0DJJ0 459 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 RFC5P40937 340 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 LAMTOR4Q0VGL1 99 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 LONRF3Q496Y0 759 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 POTEGQ6S5H5 508 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 CATSPER3Q86XQ3 398 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 C4orf32Q8N8J7 132 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 CLP1Q92989 425 aaKnown RBP14.83□□□□□ -0.04
RNF4-215ENST00000511843 JPH2Q9BR39 696 aaPredicted RBP14.83□□□□□ -0.04
RNF4-215ENST00000511843 MINDY3Q9H8M7 445 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 IFT122Q9HBG6 1241 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 ALG13Q9NP73 1137 aaKnown RBP14.83□□□□□ -0.04
RNF4-215ENST00000511843 GTF3C3Q9Y5Q9 886 aa14.83□□□□□ -0.04
RNF4-215ENST00000511843 VCANP13611 3396 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 C5orf67F2Z3F1 127 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 LYPLA2O95372 231 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 ZSCAN20P17040 1043 aaPredicted RBP14.82□□□□□ -0.04
RNF4-215ENST00000511843 FAM189BP81408 668 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 ZNF410Q86VK4 478 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 ECHDC2Q86YB7 292 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 NEK9Q8TD19 979 aa14.82□□□□□ -0.04
RNF4-215ENST00000511843 PSPC1Q8WXF1 523 aaKnown RBP14.82□□□□□ -0.04
RNF4-215ENST00000511843 MRPL38Q96DV4 380 aaKnown RBP14.82□□□□□ -0.04
RNF4-215ENST00000511843 CCDC43Q96MW1 224 aaKnown RBP14.82□□□□□ -0.04
RNF4-215ENST00000511843 MTRQ99707 1265 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms