RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 NOC4LQ9BVI4 516 aaKnown RBP16.74■□□□□ 0.27
SCLT1-209ENST00000511426 TAB2Q9NYJ8 693 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 NRBP1Q9UHY1 535 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 PHLPP2Q6ZVD8 1323 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 ARID2Q68CP9 1835 aa16.74■□□□□ 0.27
SCLT1-209ENST00000511426 ATP4AP20648 1035 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 HOXD13P35453 343 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 KCNJ6P48051 423 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 ARHGAP1Q07960 439 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 CRHR2Q13324 411 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 ACVR2BQ13705 512 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 HSP90AA2PQ14568 343 aaPredicted RBP16.73■□□□□ 0.27
SCLT1-209ENST00000511426 FAM102BQ5T8I3 360 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 CCDC51Q96ER9 411 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 ERGIC2Q96RQ1 377 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 NUP58Q9BVL2 599 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 VPS16Q9H269 839 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 CREBZFQ9NS37 354 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 ERAP1Q9NZ08 941 aa16.73■□□□□ 0.27
SCLT1-209ENST00000511426 HBP1O60381 514 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 HOXD8P13378 290 aaPredicted RBP16.72■□□□□ 0.27
SCLT1-209ENST00000511426 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
SCLT1-209ENST00000511426 UBXN1Q04323 297 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 EMC2Q15006 297 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 VWA3BQ502W6 1294 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 FIGNQ5HY92 759 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 HAUS6Q7Z4H7 955 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 CNGA4Q8IV77 575 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 NPLOC4Q8TAT6 608 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 GLG1Q92896 1179 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 CFHR5Q9BXR6 569 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 WDR81Q562E7 1941 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 ZMYM2Q9UBW7 1377 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 TGFB1I1O43294 461 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 PPFIA4O75335 1185 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 NR3C1P04150 777 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 EPB41P11171 864 aaKnown RBP16.72■□□□□ 0.27
SCLT1-209ENST00000511426 NAMPTP43490 491 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 MTERF2Q49AM1 385 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 PPFIBP1Q86W92 1011 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 CACTINQ8WUQ7 758 aaKnown RBP16.72■□□□□ 0.27
SCLT1-209ENST00000511426 TCP11Q8WWU5 503 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 CEP89Q96ST8 783 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 NDST4Q9H3R1 872 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 XPNPEP1Q9NQW7 623 aa16.72■□□□□ 0.27
SCLT1-209ENST00000511426 DOCK5Q9H7D0 1870 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 TMEM150BA6NC51 233 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 TNPO2O14787 897 aaKnown RBP16.71■□□□□ 0.27
SCLT1-209ENST00000511426 MAPK13O15264 365 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 TEX33O43247 280 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 ZNF500O60304 480 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-209ENST00000511426 MAFO75444 373 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-209ENST00000511426 XRCC5P13010 732 aaKnown RBP16.71■□□□□ 0.27
SCLT1-209ENST00000511426 NPTX2P47972 431 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 FCGRTP55899 365 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 PEX3P56589 373 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 MIIPQ5JXC2 388 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 CREBRFQ8IUR6 639 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 MAP4K3Q8IVH8 894 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 KCNF1Q9H3M0 494 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 KMT5AQ9NQR1 393 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 PDGFCQ9NRA1 345 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 ZNF215Q9UL58 517 aaPredicted RBP16.71■□□□□ 0.27
SCLT1-209ENST00000511426 Q9Y3F1 56 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 TELO2Q9Y4R8 837 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 COL1A2P08123 1366 aa16.71■□□□□ 0.27
SCLT1-209ENST00000511426 MYH9P35579 1960 aaKnown RBP16.7■□□□□ 0.26
SCLT1-209ENST00000511426 IGHA2P01877 340 aa16.7■□□□□ 0.26
SCLT1-209ENST00000511426 PSMC2P35998 433 aaKnown RBP16.7■□□□□ 0.26
SCLT1-209ENST00000511426 TBC1D8BQ0IIM8 1120 aa16.7■□□□□ 0.26
SCLT1-209ENST00000511426 DEFB115Q30KQ5 88 aa16.7■□□□□ 0.26
SCLT1-209ENST00000511426 MAEAQ7L5Y9 396 aa16.7■□□□□ 0.26
SCLT1-209ENST00000511426 SYCP3Q8IZU3 236 aa16.7■□□□□ 0.26
SCLT1-209ENST00000511426 TMEM161BQ8NDZ6 487 aa16.7■□□□□ 0.26
SCLT1-209ENST00000511426 AGPAT3Q9NRZ7 376 aa16.7■□□□□ 0.26
SCLT1-209ENST00000511426 DMAC2Q9NW81 257 aa16.7■□□□□ 0.26
SCLT1-209ENST00000511426 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.7■□□□□ 0.26
SCLT1-209ENST00000511426 ARMCX3Q9UH62 379 aaPredicted RBP16.7■□□□□ 0.26
SCLT1-209ENST00000511426 AKR1B15C9JRZ8 316 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 SORBS3O60504 671 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 ARL2P36404 184 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 ADCYAP1R1P41586 468 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 ZC2HC1CQ53FD0 456 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 IER5Q5VY09 327 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 PANX2Q96RD6 677 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 NAA15Q9BXJ9 866 aaKnown RBP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 POLR3FQ9H1D9 316 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 ARHGAP28Q9P2N2 729 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 GJD2Q9UKL4 321 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 FRMD4BQ9Y2L6 1034 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 IGKV6-21A0A0C4DH24 114 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 KIAA0391O15091 583 aaKnown RBP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 ENPEPQ07075 957 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 PLCB4Q15147 1175 aa16.69■□□□□ 0.26
SCLT1-209ENST00000511426 BRDTQ58F21 947 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-209ENST00000511426 ZNF484Q5JVG2 852 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms