RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 ADAM9Q13443 819 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 MYBPC2Q14324 1141 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 ARHGEF6Q15052 776 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 CCDC144BQ3MJ40 725 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 HSDL1Q3SXM5 330 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 MFSD14CQ5VZR4 134 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 CCDC186Q7Z3E2 898 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 PPFIBP1Q86W92 1011 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 DAW1Q8N136 415 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 OR6J1Q8NGC5 347 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 IQCDQ96DY2 449 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 NAP1L5Q96NT1 182 aaPredicted RBP13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 PCYT2Q99447 389 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 NOC4LQ9BVI4 516 aaKnown RBP13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 KATNBL1Q9H079 304 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 VPS16Q9H269 839 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 DHX33Q9H6R0 707 aaKnown RBP13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 METTL14Q9HCE5 456 aaKnown RBP13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 KMT5AQ9NQR1 393 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 TAB2Q9NYJ8 693 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 MGAMO43451 1857 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 TMEM150BA6NC51 233 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 CCDC169A6NNP5 214 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 LGALS16A8MUM7 142 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 SLC16A3O15427 465 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 CYP2B6P20813 491 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 SFPQP23246 707 aaKnown RBP eCLIP13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 NR2F2P24468 414 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 PSMC4P43686 418 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 CASP5P51878 434 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 LACTBP83111 547 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 GTF2BQ00403 316 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 UBXN1Q04323 297 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 TARBP2Q15633 366 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 MAN2A1Q16706 1144 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 DGKDQ16760 1214 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 ZNF484Q5JVG2 852 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 LRRC55Q6ZSA7 311 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 HAUS6Q7Z4H7 955 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 ZSCAN30Q86W11 494 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 IRF2BP1Q8IU81 584 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 ZC3H3Q8IXZ2 948 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 GLIS3Q8NEA6 775 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 COPS5Q92905 334 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 NTPCRQ9BSD7 190 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 CFHR5Q9BXR6 569 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 AP5M1Q9H0R1 490 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 POLR3FQ9H1D9 316 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 PDLIM7Q9NR12 457 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 FAM184BQ9ULE4 1060 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 Q9Y3F1 56 aa13.22□□□□□ -0.29
POLR2J3-211ENST00000506060 COL1A2P08123 1366 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 ITIH6Q6UXX5 1313 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 A0A1W2PQC6 194 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 MAGEB2O15479 319 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 MAFO75444 373 aaPredicted RBP13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 PPP1R37O75864 691 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 NR3C1P04150 777 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 ATP4AP20648 1035 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 NAMPTP43490 491 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 MARSP56192 900 aaKnown RBP13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 SP3Q02447 781 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 MXD4Q14582 209 aaPredicted RBP13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 PLCB4Q15147 1175 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 IER5Q5VY09 327 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 APTXQ7Z2E3 356 aaKnown RBP13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 FRMD5Q7Z6J6 570 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 RETREG2Q8NC44 543 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 AFG1LQ8WV93 481 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 FIZ1Q96SL8 496 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 SH2D3AQ9BRG2 576 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 MKNK1Q9BUB5 465 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 STRA6Q9BX79 667 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 FGFBP2Q9BYJ0 223 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 POLD4Q9HCU8 107 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 FRMD4BQ9Y2L6 1034 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 ZKSCAN5Q9Y2L8 839 aa13.21□□□□□ -0.29
POLR2J3-211ENST00000506060 SLC16A4O15374 487 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 AOC2O75106 756 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 LGALS2P05162 132 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 SMPD1P17405 629 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 PTGS1P23219 599 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 PSMC2P35998 433 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 NPTX2P47972 431 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 CPT1AP50416 773 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 STRN3Q13033 797 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 TFDP1Q14186 410 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 ZC2HC1CQ53FD0 456 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 SLC9A9Q8IVB4 645 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 CCDC112Q8NEF3 446 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 DEPTORQ8TB45 409 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 PSPC1Q8WXF1 523 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 ZIC5Q96T25 663 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 NUP58Q9BVL2 599 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 GPRC5CQ9NQ84 441 aa13.2□□□□□ -0.3
POLR2J3-211ENST00000506060 XPNPEP1Q9NQW7 623 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms