RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 SKIV2L2P42285 1042 aaKnown RBP5.09□□□□□ -1.59
NEAT1-202ENST00000501122 COX10Q12887 443 aa5.09□□□□□ -1.59
NEAT1-202ENST00000501122 CRLF3Q8IUI8 442 aa5.09□□□□□ -1.59
NEAT1-202ENST00000501122 KLHL42Q9P2K6 505 aa5.09□□□□□ -1.59
NEAT1-202ENST00000501122 RWDD2AQ9UIY3 292 aa5.09□□□□□ -1.59
NEAT1-202ENST00000501122 DNAJC12Q9UKB3 198 aa5.09□□□□□ -1.59
NEAT1-202ENST00000501122 ENC1O14682 589 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 HOXD12P35452 270 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 BYSLQ13895 437 aaKnown RBP5.09□□□□□ -1.6
NEAT1-202ENST00000501122 DUS1LQ6P1R4 473 aaKnown RBP5.09□□□□□ -1.6
NEAT1-202ENST00000501122 C2CD5Q86YS7 1000 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 MICALL2Q8IY33 904 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 KIFC2Q96AC6 838 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 MICAL3Q7RTP6 2002 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 TMEM53Q6P2H8 277 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 CUEDC2Q9H467 287 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 SAV1Q9H4B6 383 aaPredicted RBP5.09□□□□□ -1.6
NEAT1-202ENST00000501122 COQ6Q9Y2Z9 468 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 TMCC2O75069 709 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 TNFAIP3P21580 790 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 SLC1A1P43005 524 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 PLTPP55058 493 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 CENPUQ71F23 418 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 AKAP14Q86UN6 197 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 FMO2Q99518 471 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 SLC39A2Q9NP94 309 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 SUN2Q9UH99 717 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 MYO18AQ92614 2054 aaKnown RBP5.09□□□□□ -1.6
NEAT1-202ENST00000501122 GTF2H1P32780 548 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 TCHHL1Q5QJ38 904 aaPredicted RBP5.09□□□□□ -1.6
NEAT1-202ENST00000501122 SOX13Q9UN79 622 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 N6AMT1Q9Y5N5 214 aa5.09□□□□□ -1.6
NEAT1-202ENST00000501122 KDRP35968 1356 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 VAV1P15498 845 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 MFAP3P55082 362 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 CSTF3Q12996 717 aaKnown RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PCDH12Q9NPG4 1184 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PSMD11O00231 422 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 CCRL2O00421 344 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 EIF4BP23588 611 aaKnown RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 NR1D2Q14995 579 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 DEPDC1Q5TB30 811 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 SNX30Q5VWJ9 437 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 ARMC6Q6NXE6 501 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 CACYBPQ9HB71 228 aaKnown RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 KIAA1586Q9HCI6 787 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 FBXO28Q9NVF7 368 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 TRNAU1APQ9NX07 287 aaKnown RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 SPATA2Q9UM82 520 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 BTBD3Q9Y2F9 522 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 ATG16L1Q676U5 607 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 VPS8Q8N3P4 1428 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 RPS6KL1Q9Y6S9 549 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 POTECB2RU33 542 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 GJC1P36383 396 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 TCP11X2Q5H9J9 407 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 YIPF2Q9BWQ6 316 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 WDR97A6NE52 1622 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 STX5Q13190 355 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 SLC35C2Q9NQQ7 365 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PPP1R2P41236 205 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 BLMHQ13867 455 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PPP1R2P3Q6NXS1 205 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 ERICH5Q6P6B1 374 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 OR8H2Q8N162 312 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PHACTR3Q96KR7 559 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 L1RE1Q9UN81 338 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 SLC4A4Q9Y6R1 1079 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PSIP1O75475 530 aaKnown RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 IL4RP24394 825 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 MAP3K12Q12852 859 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 FXNQ16595 210 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 UGP2Q16851 508 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 TYW1BQ6NUM6 668 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PLEKHM2Q8IWE5 1019 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 CDC26Q8NHZ8 85 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PCMTD2Q9NV79 361 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 NUMA1Q14980 2115 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 FAM228BP0C875 321 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 HOXC8P31273 242 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 ZNF713Q8N859 430 aaPredicted RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 ZC3H10Q96K80 434 aaKnown RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 LLPHQ9BRT6 129 aaKnown RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 KLHL4Q9C0H6 718 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 CRTAPO75718 401 aaPredicted RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 NPPAP01160 153 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 KRT77Q7Z794 578 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 SSX5O60225 188 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PHC1P78364 1004 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 CALML4Q96GE6 196 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 ZNF224Q9NZL3 707 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 IYDQ6PHW0 289 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 PLEKHM3Q6ZWE6 761 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 OTULINQ96BN8 352 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 SERPINB2P05120 415 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 GAP43P17677 238 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 ATXN3P54252 364 aaPredicted RBP5.08□□□□□ -1.6
NEAT1-202ENST00000501122 VPS37DQ86XT2 251 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 MICU2Q8IYU8 434 aa5.08□□□□□ -1.6
NEAT1-202ENST00000501122 AGBL1Q96MI9 1066 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms