RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 DNM3Q9UQ16 869 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 NOC2LQ9Y3T9 749 aaKnown RBP18.66■□□□□ 0.58
PRKCB-210ENST00000498739 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.65■□□□□ 0.58
PRKCB-210ENST00000498739 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.65■□□□□ 0.58
PRKCB-210ENST00000498739 SOX1O00570 391 aaPredicted RBP18.65■□□□□ 0.58
PRKCB-210ENST00000498739 EFCAB14O75071 495 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 ANP32AP39687 249 aaKnown RBP18.65■□□□□ 0.58
PRKCB-210ENST00000498739 WDR5P61964 334 aaKnown RBP18.65■□□□□ 0.58
PRKCB-210ENST00000498739 CDC42EP1Q00587 391 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 DNM1Q05193 864 aaKnown RBP18.65■□□□□ 0.58
PRKCB-210ENST00000498739 GRB10Q13322 594 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 SPECC1Q5M775 1068 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 HYIQ5T013 277 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 FAM109BQ6ICB4 259 aaPredicted RBP18.65■□□□□ 0.58
PRKCB-210ENST00000498739 PADI6Q6TGC4 694 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 MAEAQ7L5Y9 396 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 KSR1Q8IVT5 923 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 RASSF8Q8NHQ8 419 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 PRPF31Q8WWY3 499 aaKnown RBP18.65■□□□□ 0.58
PRKCB-210ENST00000498739 CALML4Q96GE6 196 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 CLIC6Q96NY7 704 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 PADI3Q9ULW8 664 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 COL4A3BPQ9Y5P4 624 aa18.65■□□□□ 0.58
PRKCB-210ENST00000498739 MORC2Q9Y6X9 1032 aaPredicted RBP18.65■□□□□ 0.58
PRKCB-210ENST00000498739 EVPLQ92817 2033 aa18.64■□□□□ 0.58
PRKCB-210ENST00000498739 A0A087WZ62 844 aa18.64■□□□□ 0.57
PRKCB-210ENST00000498739 GRXCR1A8MXD5 290 aa18.64■□□□□ 0.57
PRKCB-210ENST00000498739 SPTLC2O15270 562 aa18.64■□□□□ 0.57
PRKCB-210ENST00000498739 YEATS4O95619 227 aa18.64■□□□□ 0.57
PRKCB-210ENST00000498739 EYA4O95677 639 aa18.64■□□□□ 0.57
PRKCB-210ENST00000498739 ATP2A2P16615 1042 aaKnown RBP18.64■□□□□ 0.57
PRKCB-210ENST00000498739 NFX1Q12986 1120 aaKnown RBP18.64■□□□□ 0.57
PRKCB-210ENST00000498739 ATL3Q6DD88 541 aa18.64■□□□□ 0.57
PRKCB-210ENST00000498739 KCNK18Q7Z418 384 aa18.64■□□□□ 0.57
PRKCB-210ENST00000498739 ZNF410Q86VK4 478 aa18.64■□□□□ 0.57
PRKCB-210ENST00000498739 KRI1Q8N9T8 703 aaKnown RBP18.64■□□□□ 0.57
PRKCB-210ENST00000498739 SLC9A7Q96T83 725 aa18.64■□□□□ 0.57
PRKCB-210ENST00000498739 FDXACB1Q9BRP7 624 aaPredicted RBP18.64■□□□□ 0.57
PRKCB-210ENST00000498739 GCOM2Q9BZD3 368 aaPredicted RBP18.64■□□□□ 0.57
PRKCB-210ENST00000498739 GPR182O15218 404 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 SLC26A4O43511 780 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 DARSP14868 501 aaKnown RBP18.63■□□□□ 0.57
PRKCB-210ENST00000498739 EIF4BP23588 611 aaKnown RBP18.63■□□□□ 0.57
PRKCB-210ENST00000498739 DEFB103AP81534 67 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 LAMTOR4Q0VGL1 99 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 KARSQ15046 597 aaKnown RBP18.63■□□□□ 0.57
PRKCB-210ENST00000498739 TMEM119Q4V9L6 283 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 ODR4Q5SWX8 454 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.63■□□□□ 0.573e-12■□□□□ 10.2
PRKCB-210ENST00000498739 FAM228AQ86W67 206 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 MCPH1Q8NEM0 835 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 TET1Q8NFU7 2136 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 LRCH3Q96II8 777 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 EPSTI1Q96J88 318 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 POLR3FQ9H1D9 316 aaPredicted RBP18.63■□□□□ 0.57
PRKCB-210ENST00000498739 ERVK-5Q9HDB9 667 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 GPRC5CQ9NQ84 441 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 CFAP45Q9UL16 551 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 ST3GAL5Q9UNP4 418 aa18.63■□□□□ 0.57
PRKCB-210ENST00000498739 ASAP2O43150 1006 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 PPP6R2O75170 966 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 AMHP03971 560 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 SSBP05455 408 aaKnown RBP eCLIP18.62■□□□□ 0.57
PRKCB-210ENST00000498739 SRGAP2CP0DJJ0 459 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 CYP11B2P19099 503 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 NCLP19338 710 aaKnown RBP18.62■□□□□ 0.57
PRKCB-210ENST00000498739 TXLNAP40222 546 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 FXR1P51114 621 aaKnown RBP eCLIP18.62■□□□□ 0.571e-8■■□□□ 13.7
PRKCB-210ENST00000498739 SMAD3P84022 425 aaKnown RBP18.62■□□□□ 0.57
PRKCB-210ENST00000498739 FAM102BQ5T8I3 360 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 USP49Q70CQ1 688 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 KCTD17Q8N5Z5 321 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 PHOSPHO2Q8TCD6 241 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 SYMPKQ92797 1274 aaKnown RBP18.62■□□□□ 0.57
PRKCB-210ENST00000498739 FTHL17Q9BXU8 183 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 CCSER1Q9C0I3 900 aa18.62■□□□□ 0.57
PRKCB-210ENST00000498739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.61■□□□□ 0.57
PRKCB-210ENST00000498739 CSDE1O75534 798 aaKnown RBP18.61■□□□□ 0.57
PRKCB-210ENST00000498739 PLCG1P19174 1290 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 FGFR4P22455 802 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 ARL2P36404 184 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 NUCB2P80303 420 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 MXD4Q14582 209 aaPredicted RBP18.61■□□□□ 0.57
PRKCB-210ENST00000498739 TMCO2Q7Z6W1 182 aaPredicted RBP18.61■□□□□ 0.57
PRKCB-210ENST00000498739 MYOCDQ8IZQ8 938 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 RNF149Q8NC42 400 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 KCNG4Q8TDN1 519 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 ASAP3Q8TDY4 903 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 INO80BQ9C086 356 aaPredicted RBP18.61■□□□□ 0.57
PRKCB-210ENST00000498739 CCDC39Q9UFE4 941 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 ATP6V1DQ9Y5K8 247 aa18.61■□□□□ 0.57
PRKCB-210ENST00000498739 GLRA2P23416 452 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 DDIT3P35638 169 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 RABGGTBP53611 331 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 CAPSQ13938 189 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 TFDP1Q14186 410 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 FAM117BQ6P1L5 589 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 HERC6Q8IVU3 1022 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 LINC01599Q8WXQ3 324 aa18.6■□□□□ 0.57
PRKCB-210ENST00000498739 CHAMP1Q96JM3 812 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms