RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SLC13A1Q9BZW2 595 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 PRDM12Q9H4Q4 367 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 L2HGDHQ9H9P8 463 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 CCM2LQ9NUG4 571 aaPredicted RBP6.45□□□□□ -1.38
VPS36-206ENST00000497149 NTMQ9P121 344 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 KLHL42Q9P2K6 505 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 FBXO10Q9UK96 956 aa6.45□□□□□ -1.38
VPS36-206ENST00000497149 G3BP2Q9UN86 482 aaKnown RBP6.45□□□□□ -1.38
VPS36-206ENST00000497149 OPHN1O60890 802 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 KLHL18O94889 574 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 LPLP06858 475 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 ADCY8P40145 1251 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 SARSP49591 514 aaKnown RBP6.44□□□□□ -1.38
VPS36-206ENST00000497149 AFF3P51826 1226 aaKnown RBP6.44□□□□□ -1.38
VPS36-206ENST00000497149 EPHB1P54762 984 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 MRPS9P82933 396 aaKnown RBP6.44□□□□□ -1.38
VPS36-206ENST00000497149 MCL1Q07820 350 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 MAP3K12Q12852 859 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 PCBP2Q15366 365 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS36-206ENST00000497149 PKN1Q16512 942 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS36-206ENST00000497149 BMP8AQ7Z5Y6 402 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 ADGRG2Q8IZP9 1017 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 RSAD2Q8WXG1 361 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 JDP2Q8WYK2 163 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 RAX2Q96IS3 184 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 DNAJC28Q9NX36 388 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 MKS1Q9NXB0 559 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 PRSS50Q9UI38 385 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 EDARQ9UNE0 448 aa6.44□□□□□ -1.38
VPS36-206ENST00000497149 A0A0G2JNJ9 132 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 PCDHGA12O60330 932 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 CUTAO60888 179 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 CCND1P24385 295 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 POLD1P28340 1107 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 LGALS4P56470 323 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 ANTXR2P58335 489 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 KRT85P78386 507 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 SRSF2Q01130 221 aaKnown RBP6.43□□□□□ -1.38
VPS36-206ENST00000497149 TRIM25Q14258 630 aaKnown RBP6.43□□□□□ -1.38
VPS36-206ENST00000497149 DGKDQ16760 1214 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 TOR2AQ5JU69 321 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 TMEM200BQ69YZ2 307 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 OTOP2Q7RTS6 562 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 KCNK18Q7Z418 384 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 ZBTB46Q86UZ6 589 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 SLC41A1Q8IVJ1 513 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 RAVER1Q8IY67 606 aaKnown RBP6.43□□□□□ -1.38
VPS36-206ENST00000497149 BCL6BQ8N143 479 aaPredicted RBP6.43□□□□□ -1.38
VPS36-206ENST00000497149 NUDT10Q8NFP7 164 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 NUDT11Q96G61 164 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 YTHDC1Q96MU7 727 aaKnown RBP6.43□□□□□ -1.38
VPS36-206ENST00000497149 NOL10Q9BSC4 688 aaKnown RBP6.43□□□□□ -1.38
VPS36-206ENST00000497149 QRSL1Q9H0R6 528 aaKnown RBP6.43□□□□□ -1.38
VPS36-206ENST00000497149 KCTD10Q9H3F6 313 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 AASDHPPTQ9NRN7 309 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 Q9UFV3 132 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 CDC42EP3Q9UKI2 254 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 USP18Q9UMW8 372 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 PCDHB6Q9Y5E3 794 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 PCDHGA9Q9Y5G4 932 aaKnown RBP6.43□□□□□ -1.38
VPS36-206ENST00000497149 PCDHGA8Q9Y5G5 932 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 PCDHGA7Q9Y5G6 932 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 PCDHGA6Q9Y5G7 932 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 PCDHGA3Q9Y5H0 932 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 PCDHGA2Q9Y5H1 932 aa6.43□□□□□ -1.38
VPS36-206ENST00000497149 A0A1B0GTL3 188 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 KLHL33A6NCF5 533 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 DBX1A6NMT0 343 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 MTHFD2P13995 350 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 MTNR1BP49286 362 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 TOP3AQ13472 1001 aaPredicted RBP6.42□□□□□ -1.38
VPS36-206ENST00000497149 EIF4HQ15056 248 aaKnown RBP6.42□□□□□ -1.38
VPS36-206ENST00000497149 CLUL1Q15846 466 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 ZNF124Q15973 351 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 TMEM151BQ8IW70 566 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 CARFQ8N187 725 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 CDYL2Q8N8U2 506 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 LINC01356Q8N9X3 169 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 OR5AN1Q8NGI8 311 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 GAB3Q8WWW8 586 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 HOOK2Q96ED9 719 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 SPATA25Q9BR10 227 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 HAPLN2Q9GZV7 340 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 SAE1Q9UBE0 346 aaPredicted RBP6.42□□□□□ -1.38
VPS36-206ENST00000497149 MAGEL2Q9UJ55 1249 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 SYNPO2Q9UMS6 1093 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 MRFAP1Q9Y605 127 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 EID1Q9Y6B2 187 aa6.42□□□□□ -1.38
VPS36-206ENST00000497149 CELA3BP08861 270 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 GPR15P49685 360 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 RAB27AP51159 221 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 VMACQ2NL98 169 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 MCTP2Q6DN12 878 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 Q6ZUG5 572 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 PNMA8AQ86V59 439 aaPredicted RBP6.41□□□□□ -1.38
VPS36-206ENST00000497149 TP53I13Q8NBR0 393 aaPredicted RBP6.41□□□□□ -1.38
VPS36-206ENST00000497149 OR14C36Q8NHC7 312 aa6.41□□□□□ -1.38
VPS36-206ENST00000497149 AUTS2Q8WXX7 1259 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms