RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 GPM6BQ13491 265 aa12.22□□□□□ -0.45
ECM1-206ENST00000496744 BTG3Q14201 252 aaPredicted RBP12.22□□□□□ -0.45
ECM1-206ENST00000496744 CTTNQ14247 550 aaKnown RBP12.22□□□□□ -0.45
ECM1-206ENST00000496744 SAFBQ15424 915 aaKnown RBP eCLIP12.22□□□□□ -0.45
ECM1-206ENST00000496744 ODR4Q5SWX8 454 aa12.22□□□□□ -0.45
ECM1-206ENST00000496744 KSR1Q8IVT5 923 aa12.22□□□□□ -0.45
ECM1-206ENST00000496744 CMTR2Q8IYT2 770 aaKnown RBP12.22□□□□□ -0.45
ECM1-206ENST00000496744 TMX3Q96JJ7 454 aa12.22□□□□□ -0.45
ECM1-206ENST00000496744 ASB2Q96Q27 587 aa12.22□□□□□ -0.45
ECM1-206ENST00000496744 EIF2AK1Q9BQI3 630 aaKnown RBP12.22□□□□□ -0.45
ECM1-206ENST00000496744 ZSWIM4Q9H7M6 989 aa12.22□□□□□ -0.45
ECM1-206ENST00000496744 C1orf112Q9NSG2 853 aa12.22□□□□□ -0.45
ECM1-206ENST00000496744 SUCLA2Q9P2R7 463 aaPredicted RBP12.22□□□□□ -0.45
ECM1-206ENST00000496744 THEGQ9P2T0 379 aa12.22□□□□□ -0.45
ECM1-206ENST00000496744 MRPL42Q9Y6G3 142 aaKnown RBP12.22□□□□□ -0.45
ECM1-206ENST00000496744 A0A087WZ62 844 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 DENND3A2RUS2 1198 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 DKC1O60832 514 aaKnown RBP eCLIP12.21□□□□□ -0.45
ECM1-206ENST00000496744 RB1P06400 928 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 STAG3L1P0CL83 205 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 SPATA31C1P0DKV0 1188 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 ATP2B1P20020 1258 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 FGFR4P22455 802 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.45
ECM1-206ENST00000496744 MCM7P33993 719 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 CDC42EP1Q00587 391 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 TFF2Q03403 129 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 FAM102BQ5T8I3 360 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 NOSTRINQ8IVI9 506 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 TPH2Q8IWU9 490 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 C4orf32Q8N8J7 132 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 MRPL38Q96DV4 380 aaKnown RBP12.21□□□□□ -0.45
ECM1-206ENST00000496744 CEP170P1Q96L14 293 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.45
ECM1-206ENST00000496744 IFT122Q9HBG6 1241 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 RNF19AQ9NV58 838 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 PPME1Q9Y570 386 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 PCDHB7Q9Y5E2 793 aa12.21□□□□□ -0.45
ECM1-206ENST00000496744 MUC3AQ02505 3323 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 GRM6O15303 877 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 ST18O60284 1047 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 CTNNB1P35222 781 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 DNM2P50570 870 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 TOB1P50616 345 aaPredicted RBP12.2□□□□□ -0.46
ECM1-206ENST00000496744 MRPS5P82675 430 aaKnown RBP12.2□□□□□ -0.46
ECM1-206ENST00000496744 CAMK1Q14012 370 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 ZNF174Q15697 407 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 PAN2Q504Q3 1202 aaKnown RBP12.2□□□□□ -0.46
ECM1-206ENST00000496744 TJAP1Q5JTD0 557 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 ZNF410Q86VK4 478 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 RHPN2Q8IUC4 686 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 FAM184AQ8NB25 1140 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 PRPF31Q8WWY3 499 aaKnown RBP12.2□□□□□ -0.46
ECM1-206ENST00000496744 NLRP7Q8WX94 980 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 TMEM143Q96AN5 459 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 GCOM2Q9BZD3 368 aaPredicted RBP12.2□□□□□ -0.46
ECM1-206ENST00000496744 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
ECM1-206ENST00000496744 XPNPEP1Q9NQW7 623 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 MYO7AQ13402 2215 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 BRWD1Q9NSI6 2320 aa12.2□□□□□ -0.46
ECM1-206ENST00000496744 NLRC5Q86WI3 1866 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 A0A087WWV3 80 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.19□□□□□ -0.46
ECM1-206ENST00000496744 POTEMA6NI47 508 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 FGFR1P11362 822 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 BMP1P13497 986 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 RFC5P40937 340 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 NBR1Q14596 966 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 SKIV2LQ15477 1246 aaKnown RBP12.19□□□□□ -0.46
ECM1-206ENST00000496744 XKR9Q5GH70 373 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 LRRC55Q6ZSA7 311 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 OTUD6AQ7L8S5 288 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 ZNF598Q86UK7 904 aaKnown RBP12.19□□□□□ -0.46
ECM1-206ENST00000496744 CATSPER3Q86XQ3 398 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 SLC7A3Q8WY07 619 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 JPH2Q9BR39 696 aaPredicted RBP12.19□□□□□ -0.46
ECM1-206ENST00000496744 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 UPF2Q9HAU5 1272 aaKnown RBP12.19□□□□□ -0.46
ECM1-206ENST00000496744 ANKEF1Q9NU02 776 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 LRFN2Q9ULH4 789 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 PLAGL2Q9UPG8 496 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 RWDD3Q9Y3V2 267 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 RALGAPA2Q2PPJ7 1873 aa12.19□□□□□ -0.46
ECM1-206ENST00000496744 A0A0U1RQF3 1178 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 XRCC6P12956 609 aaKnown RBP eCLIP12.18□□□□□ -0.46
ECM1-206ENST00000496744 ZSCAN20P17040 1043 aaPredicted RBP12.18□□□□□ -0.46
ECM1-206ENST00000496744 ATF7P17544 494 aaPredicted RBP12.18□□□□□ -0.46
ECM1-206ENST00000496744 IBSPP21815 317 aaPredicted RBP12.18□□□□□ -0.46
ECM1-206ENST00000496744 DNAJB1P25685 340 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 TECP42680 631 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 TRAPPC10P48553 1259 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 POLGP54098 1239 aaPredicted RBP12.18□□□□□ -0.46
ECM1-206ENST00000496744 LAMTOR4Q0VGL1 99 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 ORC2Q13416 577 aaPredicted RBP12.18□□□□□ -0.46
ECM1-206ENST00000496744 COL19A1Q14993 1142 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 EMC2Q15006 297 aa12.18□□□□□ -0.46
ECM1-206ENST00000496744 PTPROQ16827 1216 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms