RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 RIT2Q99578 217 aa16.21■□□□□ 0.19
CXCL12-208ENST00000496375 LLPHQ9BRT6 129 aaKnown RBP16.21■□□□□ 0.19
CXCL12-208ENST00000496375 TEKT3Q9BXF9 490 aa16.21■□□□□ 0.19
CXCL12-208ENST00000496375 UNC45AQ9H3U1 944 aa16.21■□□□□ 0.19
CXCL12-208ENST00000496375 NRBP2Q9NSY0 501 aa16.21■□□□□ 0.19
CXCL12-208ENST00000496375 HCSTQ9UBK5 93 aa16.21■□□□□ 0.19
CXCL12-208ENST00000496375 CD207Q9UJ71 328 aa16.21■□□□□ 0.19
CXCL12-208ENST00000496375 HCN4Q9Y3Q4 1203 aa16.21■□□□□ 0.19
CXCL12-208ENST00000496375 PCDHB12Q9Y5F1 795 aa16.21■□□□□ 0.19
CXCL12-208ENST00000496375 CD2BP2O95400 341 aaKnown RBP16.2■□□□□ 0.18
CXCL12-208ENST00000496375 FGFR1P11362 822 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 ALADP13716 330 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 NRIP1P48552 1158 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 JAK3P52333 1124 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 FAM189BP81408 668 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 SMAD4Q13485 552 aaKnown RBP16.2■□□□□ 0.18
CXCL12-208ENST00000496375 NPY5RQ15761 445 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 ZNF668Q96K58 619 aaPredicted RBP16.2■□□□□ 0.18
CXCL12-208ENST00000496375 ADAMTS10Q9H324 1103 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 ELAC1Q9H777 363 aaKnown RBP16.2■□□□□ 0.18
CXCL12-208ENST00000496375 ATP6V0A4Q9HBG4 840 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 AAASQ9NRG9 546 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 TMEM161AQ9NX61 479 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 PCDHGC5Q9Y5F6 944 aa16.2■□□□□ 0.18
CXCL12-208ENST00000496375 C19orf67A6NJJ6 358 aa16.19■□□□□ 0.18
CXCL12-208ENST00000496375 DCXO43602 365 aa16.19■□□□□ 0.18
CXCL12-208ENST00000496375 TDP2O95551 362 aa16.19■□□□□ 0.18
CXCL12-208ENST00000496375 SFNP31947 248 aa16.19■□□□□ 0.18
CXCL12-208ENST00000496375 Q4G0T1 1027 aa16.19■□□□□ 0.18
CXCL12-208ENST00000496375 GALNT17Q6IS24 598 aa16.19■□□□□ 0.18
CXCL12-208ENST00000496375 RBM23Q86U06 439 aaKnown RBP16.19■□□□□ 0.18
CXCL12-208ENST00000496375 BLIDQ8IZY5 108 aa16.19■□□□□ 0.18
CXCL12-208ENST00000496375 EFHBQ8N7U6 833 aa16.19■□□□□ 0.18
CXCL12-208ENST00000496375 WASF1Q92558 559 aa16.19■□□□□ 0.18
CXCL12-208ENST00000496375 TYW1Q9NV66 732 aaKnown RBP16.19■□□□□ 0.18
CXCL12-208ENST00000496375 M0R2N6 131 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 PSMD10O75832 226 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 EIF4BP23588 611 aaKnown RBP16.18■□□□□ 0.18
CXCL12-208ENST00000496375 GPC3P51654 580 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 UBE3AQ05086 875 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 MIER3Q7Z3K6 550 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 THNSL1Q8IYQ7 743 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 ZNF710Q8N1W2 664 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 COLGALT1Q8NBJ5 622 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 MICAL1Q8TDZ2 1067 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 MSLNLQ96KJ4 702 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 SCLT1Q96NL6 688 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 AIFM3Q96NN9 605 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 CWH43Q9H720 699 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 TLR9Q9NR96 1032 aa16.18■□□□□ 0.18
CXCL12-208ENST00000496375 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-208ENST00000496375 CYP3A7-CYP3A51PA0A087WV96 503 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 PRR33A8MZF0 331 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 FGF18O76093 207 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 GLP2RO95838 553 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 ZSCAN20P17040 1043 aaPredicted RBP16.17■□□□□ 0.18
CXCL12-208ENST00000496375 LAG3P18627 525 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 CYP3A7P24462 503 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 CSPP1Q1MSJ5 1256 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 CCDC83Q8IWF9 413 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 RDM1Q8NG50 284 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 NLRP7Q8WX94 980 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 TMX3Q96JJ7 454 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 POP1Q99575 1024 aaKnown RBP16.17■□□□□ 0.18
CXCL12-208ENST00000496375 PHF20Q9BVI0 1012 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 TMEM117Q9H0C3 514 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 TLE6Q9H808 572 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 RNF19AQ9NV58 838 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 CLEC1BQ9P126 229 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 SEPT9Q9UHD8 586 aaPredicted RBP16.17■□□□□ 0.18
CXCL12-208ENST00000496375 BARX2Q9UMQ3 279 aaPredicted RBP16.17■□□□□ 0.18
CXCL12-208ENST00000496375 ARIH1Q9Y4X5 557 aaPredicted RBP16.17■□□□□ 0.18
CXCL12-208ENST00000496375 TRIOO75962 3097 aa16.17■□□□□ 0.18
CXCL12-208ENST00000496375 HOXA2O43364 376 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 JAK2O60674 1132 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 EYA4O95677 639 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 DARSP14868 501 aaKnown RBP16.16■□□□□ 0.18
CXCL12-208ENST00000496375 XBP1P17861 261 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 FGFR4P22455 802 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 ERVFC1P60507 584 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 HMGN5P82970 282 aaKnown RBP16.16■□□□□ 0.18
CXCL12-208ENST00000496375 DRP2Q13474 957 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 NONOQ15233 471 aaKnown RBP eCLIP16.16■□□□□ 0.18
CXCL12-208ENST00000496375 TARBP2Q15633 366 aaKnown RBP16.16■□□□□ 0.18
CXCL12-208ENST00000496375 MTERF2Q49AM1 385 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 B3GNT9Q6UX72 402 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 LRRC55Q6ZSA7 311 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 ECHDC2Q86YB7 292 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 RNF169Q8NCN4 708 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 MBOAT7Q96N66 472 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 CASD1Q96PB1 797 aa16.16■□□□□ 0.18
CXCL12-208ENST00000496375 TMEM150BA6NC51 233 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 PER2O15055 1255 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 STBD1O95210 358 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 COASYQ13057 564 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 XKR3Q5GH77 459 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 MOXD1Q6UVY6 613 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 ABI1Q8IZP0 508 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms