RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 DCAF4Q8WV16 495 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 LPAR1Q92633 364 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 FANCD2OSQ96PS1 177 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 AGXT2Q9BYV1 514 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 ASCC2Q9H1I8 757 aaPredicted RBP8.69□□□□□ -1.02
RPGR-210ENST00000494841 ALDH8A1Q9H2A2 487 aaPredicted RBP8.69□□□□□ -1.02
RPGR-210ENST00000494841 R3HDMLQ9H3Y0 253 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 VAT1LQ9HCJ6 419 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 DISC1Q9NRI5 854 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 TPCN1Q9ULQ1 816 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 SYNPO2Q9UMS6 1093 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 RLFQ13129 1914 aa8.69□□□□□ -1.02
RPGR-210ENST00000494841 CENPFP49454 3210 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 KLRF2D3W0D1 207 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 ZBTB43O43298 467 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 FLOT1O75955 427 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 TBC1D8O95759 1140 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 PARP1P09874 1014 aaKnown RBP8.68□□□□□ -1.02
RPGR-210ENST00000494841 PDIA3P30101 505 aaKnown RBP8.68□□□□□ -1.02
RPGR-210ENST00000494841 ERVK-24P63145 666 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 CCT2P78371 535 aaKnown RBP8.68□□□□□ -1.02
RPGR-210ENST00000494841 ZNF543Q08ER8 600 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 IKQ13123 557 aaPredicted RBP8.68□□□□□ -1.02
RPGR-210ENST00000494841 INPP5AQ14642 412 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 COG2Q14746 738 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 GRM4Q14833 912 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 RABEP1Q15276 862 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 RSPO4Q2I0M5 234 aaPredicted RBP8.68□□□□□ -1.02
RPGR-210ENST00000494841 NKAPLQ5M9Q1 402 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 OTUD7BQ6GQQ9 843 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 APOA5Q6Q788 366 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 SYNE3Q6ZMZ3 975 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 NBPF11Q86T75 865 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 MICU3Q86XE3 530 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 FBXL16Q8N461 479 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 FANCBQ8NB91 859 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 PLPPR2Q96GM1 343 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 NCOA5Q9HCD5 579 aaKnown RBP8.68□□□□□ -1.02
RPGR-210ENST00000494841 RNF186Q9NXI6 227 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 ADAMTS1Q9UHI8 967 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 MAD2L2Q9UI95 211 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 PCDHGB7Q9Y5F8 929 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 PARP14Q460N5 1801 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 SMCHD1A6NHR9 2005 aa8.68□□□□□ -1.02
RPGR-210ENST00000494841 FAM221AA4D161 298 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 GOLGA8BA8MQT2 603 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 DCDC2CA8MYV0 355 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 DHX15O43143 795 aaKnown RBP8.67□□□□□ -1.02
RPGR-210ENST00000494841 DDAH1O94760 285 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 PLEKHA8P1O95397 391 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 LARGE1O95461 756 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 F13A1P00488 732 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 COL11A1P12107 1806 aaPredicted RBP8.67□□□□□ -1.02
RPGR-210ENST00000494841 TCF3P15923 654 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 ASPAP45381 313 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 STAT2P52630 851 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 EVCP57679 992 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 HERVK_113P62684 666 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 IRX3P78415 501 aaPredicted RBP8.67□□□□□ -1.02
RPGR-210ENST00000494841 PABPC4Q13310 644 aaKnown RBP eCLIP8.67□□□□□ -1.02
RPGR-210ENST00000494841 CRHR2Q13324 411 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 ME3Q16798 604 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 SLC35G1Q2M3R5 365 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 WIPI1Q5MNZ9 446 aaPredicted RBP8.67□□□□□ -1.02
RPGR-210ENST00000494841 SNAP47Q5SQN1 464 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 PRR23CQ6ZRP0 262 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 NT5DC4Q86YG4 428 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 SRBD1Q8N5C6 995 aaKnown RBP8.67□□□□□ -1.02
RPGR-210ENST00000494841 NECAB1Q8N987 351 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 CHURC1Q8WUH1 139 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 PIBF1Q8WXW3 757 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 ATG4CQ96DT6 458 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 ACSS3Q9H6R3 686 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 IGSF5Q9NSI5 407 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 HOXC10Q9NYD6 342 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 CPA4Q9UI42 421 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 FEM1BQ9UK73 627 aa8.67□□□□□ -1.02
RPGR-210ENST00000494841 hCG_1642624A0A1W2PR95 340 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 GOLGA8AA7E2F4 631 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 CYTH3O43739 400 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 DHX16O60231 1041 aaKnown RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 H2AFB2P0C5Z0 115 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 CALM1P0DP23 149 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 CALM2P0DP24 149 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 CALM3P0DP25 149 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 TAL1P17542 331 aaPredicted RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 RAB6AP20340 208 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 MAP4P27816 1152 aaKnown RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 NTF4P34130 210 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 EIF4A3P38919 411 aaKnown RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 METAP2P50579 478 aaKnown RBP eCLIP8.66□□□□□ -1.02
RPGR-210ENST00000494841 USP11P51784 963 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 RING1Q06587 406 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 ANKRD1Q15327 319 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 ASPRV1Q53RT3 343 aa8.66□□□□□ -1.02
RPGR-210ENST00000494841 GPATCH4Q5T3I0 446 aaKnown RBP8.66□□□□□ -1.02
RPGR-210ENST00000494841 SYDE2Q5VT97 1194 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms