RNA–Protein interactions for RNA: ENST00000494788.1

MAPRE3-209, Transcript of microtubule associated protein RP/EB family member 3, humanhuman

TSL 2

Gene MAPRE3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAPRE3-209ENST00000494788 CTCFLQ8NI51 663 aaPredicted RBP17.06■□□□□ 0.32
MAPRE3-209ENST00000494788 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
MAPRE3-209ENST00000494788 ACSF2Q96CM8 615 aaPredicted RBP17.06■□□□□ 0.32
MAPRE3-209ENST00000494788 PPP1R16BQ96T49 567 aa17.06■□□□□ 0.32
MAPRE3-209ENST00000494788 ZBP1Q9H171 429 aa17.06■□□□□ 0.32
MAPRE3-209ENST00000494788 ADAMTS10Q9H324 1103 aa17.06■□□□□ 0.32
MAPRE3-209ENST00000494788 LY9Q9HBG7 655 aa17.06■□□□□ 0.32
MAPRE3-209ENST00000494788 CACNA1GO43497 2377 aa17.06■□□□□ 0.32
MAPRE3-209ENST00000494788 FANCMQ8IYD8 2048 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 A0A0U1RQF3 1178 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 NT5C1B-RDH14C9J2C7 533 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 DHX15O43143 795 aaKnown RBP17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 ALDH7A1P49419 539 aaKnown RBP17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 GNAQP50148 359 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 POLGP54098 1239 aaPredicted RBP17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 NUCB1Q02818 461 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 PTH1RQ03431 593 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 TMEM173Q86WV6 379 aaPredicted RBP17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 MB21D2Q8IYB1 491 aaPredicted RBP17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 CMTR1Q8N1G2 835 aaKnown RBP17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 AUTS2Q8WXX7 1259 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 WNT16Q9UBV4 365 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 R4GN57 208 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 CHD6Q8TD26 2715 aa17.05■□□□□ 0.32
MAPRE3-209ENST00000494788 hCG_1642624A0A1W2PR95 340 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 KRBA1A5PL33 1030 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 CTSAP10619 480 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 GIT2Q14161 759 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 BMS1Q14692 1282 aaKnown RBP17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 FAM160B1Q5W0V3 765 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 SWSAP1Q6NVH7 229 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 PDXDC2PQ6P474 469 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 DDX53Q86TM3 631 aaKnown RBP17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 LINC01465Q8N7H1 131 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 IGSF9Q9P2J2 1179 aa17.04■□□□□ 0.32
MAPRE3-209ENST00000494788 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 BACH1O14867 736 aa17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 N4BP1O75113 896 aaKnown RBP17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 ZSCAN20P17040 1043 aaPredicted RBP17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 EIF4BP23588 611 aaKnown RBP17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 NLRP11P59045 1033 aaKnown RBP17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 CABP7Q86V35 215 aa17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 HELQQ8TDG4 1101 aa17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 BBXQ8WY36 941 aaPredicted RBP17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 TMEM169Q96HH4 297 aa17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 ZNF302Q9NR11 478 aa17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 DLGAP2Q9P1A6 1054 aa17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 FBXL21Q9UKT6 434 aa17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 MAFBQ9Y5Q3 323 aaPredicted RBP17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 CFAP47Q6ZTR5 3102 aa17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 CHD8Q9HCK8 2581 aa17.03■□□□□ 0.32
MAPRE3-209ENST00000494788 NARSO43776 548 aaKnown RBP17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 CCDC149Q6ZUS6 474 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 NIPA1Q7RTP0 329 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 TEX2Q8IWB9 1127 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 METTL13Q8N6R0 699 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 BCL7CQ8WUZ0 217 aaPredicted RBP17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 IGSF21Q96ID5 467 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 CNTNAP3BQ96NU0 1288 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 MTA3Q9BTC8 594 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 VN1R3Q9BXE9 311 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 CNTNAP3Q9BZ76 1288 aa17.02■□□□□ 0.32
MAPRE3-209ENST00000494788 MYH9P35579 1960 aaKnown RBP17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 MAGEB2O15479 319 aa17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 LILRB3O75022 631 aa17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 LETM2Q2VYF4 491 aa17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 TYW1BQ6NUM6 668 aa17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 PPFIBP1Q86W92 1011 aa17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 DCLK2Q8N568 766 aa17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 RNF169Q8NCN4 708 aa17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 RUBCNQ92622 972 aa17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 MRPL9Q9BYD2 267 aaKnown RBP17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 SFXN1Q9H9B4 322 aa17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 MAP1BP46821 2468 aaKnown RBP17.01■□□□□ 0.31
MAPRE3-209ENST00000494788 C2orf16Q68DN1 1984 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 DDX39AO00148 427 aaKnown RBP17■□□□□ 0.31
MAPRE3-209ENST00000494788 FOSP01100 380 aaPredicted RBP17■□□□□ 0.31
MAPRE3-209ENST00000494788 GALTP07902 379 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 SP9P0CG40 484 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 DARSP14868 501 aaKnown RBP17■□□□□ 0.31
MAPRE3-209ENST00000494788 CA8P35219 290 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 CLCN3P51790 818 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 TBC1D8BQ0IIM8 1120 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 PTPN14Q15678 1187 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 MIS18BP1Q6P0N0 1132 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 C15orf39Q6ZRI6 1047 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 TMTC2Q8N394 836 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 SLC44A3Q8N4M1 653 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 PGBD1Q96JS3 809 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 TRAIPQ9BWF2 469 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 RIC8AQ9NPQ8 531 aa17■□□□□ 0.31
MAPRE3-209ENST00000494788 FAM86B1E9PN63 330 aa16.99■□□□□ 0.31
MAPRE3-209ENST00000494788 IGHDP01880 384 aa16.99■□□□□ 0.31
MAPRE3-209ENST00000494788 CFHP08603 1231 aa16.99■□□□□ 0.31
MAPRE3-209ENST00000494788 FAM86B2P0C5J1 330 aa16.99■□□□□ 0.31
MAPRE3-209ENST00000494788 RXRAP19793 462 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms