RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 SMC6Q96SB8 1091 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ZBED2Q9BTP6 218 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 DENND2DQ9H6A0 471 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 NRDE2Q9H7Z3 1164 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 AS3MTQ9HBK9 375 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 ZNF304Q9HCX3 659 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 FBXL5Q9UKA1 691 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PPP1R9AQ9ULJ8 1098 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 SNX12Q9UMY4 172 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 GIT1Q9Y2X7 761 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 HBS1LQ9Y450 684 aaKnown RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 USP15Q9Y4E8 981 aaPredicted RBP4.35□□□□□ -1.71
ATG3-207ENST00000494571 TLL2Q9Y6L7 1015 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 SPATA31A6Q5VVP1 1343 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 PTCH1Q13635 1447 aa4.35□□□□□ -1.71
ATG3-207ENST00000494571 COL22A1Q8NFW1 1626 aaPredicted RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 XIRP1Q702N8 1843 aaKnown RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 A0A1B0GTH6 734 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 A0A1W2PQ27 194 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 A0A1W2PQ64 194 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 A0A1W2PQD8 194 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 SRRM3A6NNA2 597 aaPredicted RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 A8MX80 341 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 E7ENQ6 273 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 RNF113AO15541 343 aaKnown RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 GMNNO75496 209 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 BAG2O95816 211 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 ZBED1O96006 694 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 ATP6V1B1P15313 513 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 HOXD10P28358 340 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 WEE1P30291 646 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 PHBP35232 272 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 ARL1P40616 181 aaPredicted RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 TXKP42681 527 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 HNRNPMP52272 730 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATG3-207ENST00000494571 PTK2Q05397 1052 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 BIRC3Q13489 604 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 E2F2Q14209 437 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 KPNB1Q14974 876 aaKnown RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 MYLK3Q32MK0 819 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 COBLL1Q53SF7 1204 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 RFWD3Q6PCD5 774 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 CCDC174Q6PII3 467 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 IZUMO2Q6UXV1 221 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 LRRC74BQ6ZQY2 392 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 OTUD6AQ7L8S5 288 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 CHST3Q7LGC8 479 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 KRT26Q7Z3Y9 468 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 METTL16Q86W50 562 aaKnown RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 LRRC43Q8N309 656 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 NRG4Q8WWG1 115 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 GAB3Q8WWW8 586 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 STARD8Q92502 1023 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 NCSTNQ92542 709 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 GATA6Q92908 595 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 STMN2Q93045 179 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 PBKQ96KB5 322 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 ZNF317Q96PQ6 595 aaPredicted RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 TBCBQ99426 244 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 HAUS7Q99871 368 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 TM6SF1Q9BZW5 370 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 DNAI2Q9GZS0 605 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 PARVBQ9HBI1 364 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 WDR6Q9NNW5 1121 aaKnown RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 FAIMQ9NVQ4 179 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 DDX56Q9NY93 547 aaKnown RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 KIAA1522Q9P206 1035 aaPredicted RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 SAP30BPQ9UHR5 308 aaKnown RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 MAN1B1Q9UKM7 699 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 CCPG1Q9ULG6 757 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 ANGEL1Q9UNK9 670 aaKnown RBP4.34□□□□□ -1.71
ATG3-207ENST00000494571 ATP6V0A2Q9Y487 856 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 GPSM3Q9Y4H4 160 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 CAPN6Q9Y6Q1 641 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 PASKQ96RG2 1323 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 PIK3R4Q99570 1358 aa4.34□□□□□ -1.71
ATG3-207ENST00000494571 TNFRSF10AO00220 468 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 ASAP2O43150 1006 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 BUB1O43683 1085 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 SNX3O60493 162 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 TSPAN9O75954 239 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 HAUS5O94927 633 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 LMNAP02545 664 aaKnown RBP4.34□□□□□ -1.72
ATG3-207ENST00000494571 ERCC5P28715 1186 aaPredicted RBP4.34□□□□□ -1.72
ATG3-207ENST00000494571 CASP1P29466 404 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 HOXD13P35453 343 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 MXI1P50539 228 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 PPP2R5CQ13362 524 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 EIF4A2Q14240 407 aaKnown RBP4.34□□□□□ -1.72
ATG3-207ENST00000494571 PARP10Q53GL7 1025 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 EFCAB2Q5VUJ9 269 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 FASTKD5Q7L8L6 764 aaKnown RBP4.34□□□□□ -1.72
ATG3-207ENST00000494571 PIGWQ7Z7B1 504 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 KBTBD2Q8IY47 623 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 SLC38A6Q8IZM9 456 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 DEPDC4Q8N2C3 294 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 ESX1Q8N693 406 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.34□□□□□ -1.72
ATG3-207ENST00000494571 ZNF280CQ8ND82 737 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 ERP27Q96DN0 273 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms