RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 IFIH1Q9BYX4 1025 aaKnown RBP9.04□□□□□ -0.96
TM4SF1-204ENST00000493348 CSRNP2Q9H175 543 aa9.04□□□□□ -0.96
TM4SF1-204ENST00000493348 BHMT2Q9H2M3 363 aa9.04□□□□□ -0.96
TM4SF1-204ENST00000493348 CIZ1Q9ULV3 898 aaPredicted RBP9.04□□□□□ -0.96
TM4SF1-204ENST00000493348 COLQQ9Y215 455 aaPredicted RBP9.04□□□□□ -0.96
TM4SF1-204ENST00000493348 COL4A3BPQ9Y5P4 624 aa9.04□□□□□ -0.96
TM4SF1-204ENST00000493348 SLC4A7Q9Y6M7 1214 aa9.04□□□□□ -0.96
TM4SF1-204ENST00000493348 SQORQ9Y6N5 450 aa9.04□□□□□ -0.96
TM4SF1-204ENST00000493348 ABHD14A-ACY1A0A1B0GW23 586 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 DENND3A2RUS2 1198 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 ZBTB42B2RXF5 422 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 E9PMD0 336 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 AMHP03971 560 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 SRGAP2CP0DJJ0 459 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 ZSCAN20P17040 1043 aaPredicted RBP9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 SFPQP23246 707 aaKnown RBP eCLIP9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 PHKA2P46019 1235 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 PKP1Q13835 747 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 DHX8Q14562 1220 aaKnown RBP9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 PPP2R5AQ15172 486 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 PTPAQ15257 358 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 TARBP2Q15633 366 aaKnown RBP9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 TRIM71Q2Q1W2 868 aaKnown RBP9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 FAM26DQ5JW98 314 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 TMEM240Q5SV17 173 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 PADI6Q6TGC4 694 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 FAM43BQ6ZT52 329 aaPredicted RBP9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 MAEAQ7L5Y9 396 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 ZNF410Q86VK4 478 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 ZBTB8OSQ8IWT0 167 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 LINC00301Q8NCQ3 95 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 TET1Q8NFU7 2136 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 SYMPKQ92797 1274 aaKnown RBP9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 WNT8BQ93098 351 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 TMEM143Q96AN5 459 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 CCDC34Q96HJ3 373 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 DRC1Q96MC2 740 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 CTAGE1Q96RT6 745 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 OSMRQ99650 979 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.03□□□□□ -0.962e-23■□□□□ 11.2
TM4SF1-204ENST00000493348 ZBED2Q9BTP6 218 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 TIPINQ9BVW5 301 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 FTHL17Q9BXU8 183 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 LRRC27Q9C0I9 530 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 DHX33Q9H6R0 707 aaKnown RBP9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 WRAP73Q9P2S5 460 aaPredicted RBP9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 KCNG1Q9UIX4 513 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 MICAL3Q7RTP6 2002 aa9.03□□□□□ -0.96
TM4SF1-204ENST00000493348 A0A087WWV3 80 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 LRRIQ4A6NIV6 560 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 ZBTB39O15060 712 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 NBNO60934 754 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 ERLIN2O94905 339 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 CHRNA1P02708 482 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 CXCL10P02778 98 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 PLA2G4BP0C869 781 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 IBSPP21815 317 aaPredicted RBP9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 STAT6P42226 847 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 GPC3P51654 580 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 KARSQ15046 597 aaKnown RBP9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 SHHQ15465 462 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 IL17AQ16552 155 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 TPRNQ4KMQ1 711 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 SPECC1Q5M775 1068 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 FBXO47Q5MNV8 452 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 CATSPER4Q7RTX7 472 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 DBF4BQ8NFT6 615 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 PRPF31Q8WWY3 499 aaKnown RBP9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 HERVK_113Q902F9 699 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 KIFAP3Q92845 792 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 CLIC6Q96NY7 704 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 CCSER1Q9C0I3 900 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 POLR3FQ9H1D9 316 aaPredicted RBP9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 KCND2Q9NZV8 630 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 CHMP5Q9NZZ3 219 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 STK17AQ9UEE5 414 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 MSRAQ9UJ68 235 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 FBXO2Q9UK22 296 aaPredicted RBP9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 LRFN2Q9ULH4 789 aa9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 MORC2Q9Y6X9 1032 aaPredicted RBP9.02□□□□□ -0.97
TM4SF1-204ENST00000493348 TRIOBPQ9H2D6 2365 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 SIP14410 1827 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 IGKV6-21A0A0C4DH24 114 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 INO80B-WBP1J3KQ70 363 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 TBCAO75347 108 aaKnown RBP9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 STBD1O95210 358 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 STAG3L1P0CL83 205 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 ATP2A2P16615 1042 aaKnown RBP9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 CYP11B2P19099 503 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 PLCG1P19174 1290 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 EIF4BP23588 611 aaKnown RBP9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 CD52P31358 61 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 CLCN6P51797 869 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 SMTNP53814 917 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 AMPD3Q01432 767 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 MGAT3Q09327 533 aa9.01□□□□□ -0.97
TM4SF1-204ENST00000493348 LAMTOR4Q0VGL1 99 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms