RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 HOXA2O43364 376 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 EDIL3O43854 480 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 OATP04181 439 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 ZSCAN20P17040 1043 aaPredicted RBP17.94■□□□□ 0.46
PLOD3-216ENST00000489927 TMOD1P28289 359 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 ANKRD54Q6NXT1 300 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 KCNT2Q6UVM3 1135 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 LRRC43Q8N309 656 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 KCNB2Q92953 911 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 S1PR5Q9H228 398 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 DISC1Q9NRI5 854 aa17.94■□□□□ 0.46
PLOD3-216ENST00000489927 PUF60Q9UHX1 559 aaKnown RBP17.94■□□□□ 0.46
PLOD3-216ENST00000489927 MSH4O15457 936 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 CHMP2AO43633 222 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 SRGAP2BP0DMP2 458 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 TECP42680 631 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 GPC3P51654 580 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 PRKCEQ02156 737 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 NTRK3Q16288 839 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 UGCGQ16739 394 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 CLLU1OSQ5K130 101 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 IER5LQ5T953 404 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 LLGL2Q6P1M3 1020 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 CENPQQ7L2Z9 268 aaPredicted RBP17.93■□□□□ 0.46
PLOD3-216ENST00000489927 ECHDC2Q86YB7 292 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 ABI1Q8IZP0 508 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 RNF169Q8NCN4 708 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 PRSS33Q8NF86 280 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 BICD2Q8TD16 824 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 ZNF558Q96NG5 402 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 APOL5Q9BWW9 433 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 NGRNQ9NPE2 291 aaKnown RBP17.93■□□□□ 0.46
PLOD3-216ENST00000489927 NRBP2Q9NSY0 501 aa17.93■□□□□ 0.46
PLOD3-216ENST00000489927 MYH9P35579 1960 aaKnown RBP17.92■□□□□ 0.46
PLOD3-216ENST00000489927 DARSP14868 501 aaKnown RBP17.92■□□□□ 0.46
PLOD3-216ENST00000489927 FGFR4P22455 802 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 PPM1AP35813 382 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 AKAP17AQ02040 695 aaKnown RBP17.92■□□□□ 0.46
PLOD3-216ENST00000489927 KRT17Q04695 432 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 SYCE2Q6PIF2 218 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 BLOC1S2Q6QNY1 142 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 ZNF710Q8N1W2 664 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 CCDC148Q8NFR7 591 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 GJA10Q969M2 543 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 CCDC136Q96JN2 1154 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 RIT2Q99578 217 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 SLC26A6Q9BXS9 759 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 RNF26Q9BY78 433 aaPredicted RBP17.92■□□□□ 0.46
PLOD3-216ENST00000489927 VPS54Q9P1Q0 977 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 SNX14Q9Y5W7 946 aa17.92■□□□□ 0.46
PLOD3-216ENST00000489927 CSDE1O75534 798 aaKnown RBP17.91■□□□□ 0.46
PLOD3-216ENST00000489927 HSPA4P34932 840 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 SIGLEC14Q08ET2 396 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 TMC7Q7Z402 723 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 SUGP1Q8IWZ8 645 aaKnown RBP17.91■□□□□ 0.46
PLOD3-216ENST00000489927 FBXL16Q8N461 479 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 FBXL6Q8N531 539 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 SLC5A5Q92911 643 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 SCLT1Q96NL6 688 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 PHOX2BQ99453 314 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 AGXT2Q9BYV1 514 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 UNC45AQ9H3U1 944 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 SPG21Q9NZD8 308 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 USP34Q70CQ2 3546 aa17.91■□□□□ 0.46
PLOD3-216ENST00000489927 A0A0U1RQF3 1178 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 GAS7O60861 476 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 HOXB8P17481 243 aaPredicted RBP17.9■□□□□ 0.46
PLOD3-216ENST00000489927 RPS6KB1P23443 525 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 SFNP31947 248 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 USP11P51784 963 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 TBC1D8BQ0IIM8 1120 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 DRP2Q13474 957 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 LRCH2Q5VUJ6 765 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 ZNF598Q86UK7 904 aaKnown RBP17.9■□□□□ 0.46
PLOD3-216ENST00000489927 HELQQ8TDG4 1101 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 NLRP7Q8WX94 980 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 NCOA5Q9HCD5 579 aaKnown RBP17.9■□□□□ 0.46
PLOD3-216ENST00000489927 CDH22Q9UJ99 828 aa17.9■□□□□ 0.46
PLOD3-216ENST00000489927 EOMESO95936 686 aa17.89■□□□□ 0.45
PLOD3-216ENST00000489927 IFNAR1P17181 557 aa17.89■□□□□ 0.45
PLOD3-216ENST00000489927 SP100P23497 879 aaPredicted RBP17.89■□□□□ 0.45
PLOD3-216ENST00000489927 JAK3P52333 1124 aa17.89■□□□□ 0.45
PLOD3-216ENST00000489927 TARBP2Q15633 366 aaKnown RBP17.89■□□□□ 0.45
PLOD3-216ENST00000489927 PTPN21Q16825 1174 aa17.89■□□□□ 0.45
PLOD3-216ENST00000489927 SLC39A11Q8N1S5 342 aa17.89■□□□□ 0.45
PLOD3-216ENST00000489927 MRPL43Q8N983 215 aaKnown RBP17.89■□□□□ 0.45
PLOD3-216ENST00000489927 ASIC4Q96FT7 647 aa17.89■□□□□ 0.45
PLOD3-216ENST00000489927 TEKT3Q9BXF9 490 aa17.89■□□□□ 0.45
PLOD3-216ENST00000489927 HCFC2Q9Y5Z7 792 aa17.89■□□□□ 0.45
PLOD3-216ENST00000489927 TMEM150BA6NC51 233 aa17.88■□□□□ 0.45
PLOD3-216ENST00000489927 C2orf71A6NGG8 1288 aa17.88■□□□□ 0.45
PLOD3-216ENST00000489927 PSMD10O75832 226 aa17.88■□□□□ 0.45
PLOD3-216ENST00000489927 PDIA3P30101 505 aaKnown RBP17.88■□□□□ 0.45
PLOD3-216ENST00000489927 PTPN5P54829 565 aa17.88■□□□□ 0.45
PLOD3-216ENST00000489927 CCT2P78371 535 aaKnown RBP17.88■□□□□ 0.45
PLOD3-216ENST00000489927 SMC1AQ14683 1233 aaKnown RBP17.88■□□□□ 0.45
PLOD3-216ENST00000489927 TBCKQ8TEA7 893 aa17.88■□□□□ 0.45
PLOD3-216ENST00000489927 CASP10Q92851 521 aa17.88■□□□□ 0.45
PLOD3-216ENST00000489927 SH3GLB2Q9NR46 395 aa17.88■□□□□ 0.45
PLOD3-216ENST00000489927 DACT1Q9NYF0 836 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms