RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 RGS20O76081 388 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 PLEKHA8P1O95397 391 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 ZNF286BP0CG31 522 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 FOSL2P15408 326 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 TOB1P50616 345 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-208ENST00000486533 GNG11P61952 73 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 PTPN11Q06124 597 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-208ENST00000486533 STIM1Q13586 685 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 PTGISQ16647 500 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 TTC38Q5R3I4 469 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 ARL6IP4Q66PJ3 421 aaKnown RBP9.99□□□□□ -0.81
COL12A1-208ENST00000486533 GALNT17Q6IS24 598 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 KCNV1Q6PIU1 500 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 TMTC1Q8IUR5 882 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 CMTR1Q8N1G2 835 aaKnown RBP9.99□□□□□ -0.81
COL12A1-208ENST00000486533 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 PPTC7Q8NI37 304 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 CUL5Q93034 780 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 EMID1Q96A84 441 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-208ENST00000486533 LZTS2Q9BRK4 669 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 PHF20Q9BVI0 1012 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 SPZ1Q9BXG8 430 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 ZNF576Q9H609 170 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 MAGEF1Q9HAY2 307 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 SH3GLB2Q9NR46 395 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 MSRAQ9UJ68 235 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 KCNJ14Q9UNX9 436 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 V9GYY5 206 aaPredicted RBP9.99□□□□□ -0.81
COL12A1-208ENST00000486533 GBF1Q92538 1859 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 TANC1Q9C0D5 1861 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 TRIP12Q14669 1992 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-208ENST00000486533 GGPS1O95749 300 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 PFKMP08237 780 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 PPP2R3AQ06190 1150 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 BFSP2Q13515 415 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 GRIN2CQ14957 1233 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 NR1I3Q14994 352 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 BRD3Q15059 726 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 ERCC6LQ2NKX8 1250 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 TSR1Q2NL82 804 aaKnown RBP9.98□□□□□ -0.81
COL12A1-208ENST00000486533 GNPTABQ3T906 1256 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 CELF3Q5SZQ8 465 aaKnown RBP9.98□□□□□ -0.81
COL12A1-208ENST00000486533 GDF6Q6KF10 455 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-208ENST00000486533 TRIM65Q6PJ69 517 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 CCDC82Q8N4S0 544 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 C7orf31Q8N865 590 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 CCDC148Q8NFR7 591 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 MAFAQ8NHW3 353 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-208ENST00000486533 NOC3LQ8WTT2 800 aaKnown RBP9.98□□□□□ -0.81
COL12A1-208ENST00000486533 BBXQ8WY36 941 aaPredicted RBP9.98□□□□□ -0.81
COL12A1-208ENST00000486533 KAT2BQ92831 832 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 DHX58Q96C10 678 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 IQCDQ96DY2 449 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 SPATA33Q96N06 139 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 KATNAL1Q9BW62 490 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 CSRNP2Q9H175 543 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 ACBD3Q9H3P7 528 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 MLXIPQ9HAP2 919 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 SLC4A7Q9Y6M7 1214 aa9.98□□□□□ -0.81
COL12A1-208ENST00000486533 VWA3AA6NCI4 1184 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 F2P00734 622 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 TGFB3P10600 412 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 UBA1P22314 1058 aaKnown RBP9.97□□□□□ -0.81
COL12A1-208ENST00000486533 MCM3P25205 808 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 SMARCA1P28370 1054 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 LONP1P36776 959 aaKnown RBP9.97□□□□□ -0.81
COL12A1-208ENST00000486533 ATP2C1P98194 919 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-208ENST00000486533 SP2Q02086 613 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 TERF2Q15554 542 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 RAB30Q15771 203 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 KIAA0753Q2KHM9 967 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 HSDL1Q3SXM5 330 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 USP17L6PQ6QN14 398 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 TMTC3Q6ZXV5 915 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 SRBD1Q8N5C6 995 aaKnown RBP9.97□□□□□ -0.81
COL12A1-208ENST00000486533 CCDC155Q8N6L0 562 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 IGSF22Q8N9C0 903 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 TC2NQ8N9U0 490 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 EHBP1Q8NDI1 1231 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 GPKOWQ92917 476 aaPredicted RBP eCLIP9.97□□□□□ -0.81
COL12A1-208ENST00000486533 SLC4A5Q9BY07 1137 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 ARFGAP3Q9NP61 516 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 RWDD2AQ9UIY3 292 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 VPS9D1Q9Y2B5 631 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 PCDHB6Q9Y5E3 794 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 MRFAP1Q9Y605 127 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 hCG_1642624A0A1W2PR95 340 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 LAD1O00515 517 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 DLL1O00548 723 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 NOP56O00567 594 aaKnown RBP9.97□□□□□ -0.81
COL12A1-208ENST00000486533 PPFIA4O75335 1185 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 IQCF3P0C7M6 154 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 ACTN1P12814 892 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 RFC2P35250 354 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 MRPS9P82933 396 aaKnown RBP9.97□□□□□ -0.81
COL12A1-208ENST00000486533 CDKAL1Q5VV42 579 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 SESTD1Q86VW0 696 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 TMEM139Q8IV31 216 aa9.97□□□□□ -0.81
COL12A1-208ENST00000486533 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL12A1-208ENST00000486533 CAGE1Q8TC20 777 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms