RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 FGFR4P22455 802 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 EIF4BP23588 611 aaKnown RBP21.7■■□□□ 1.06
COL27A1-205ENST00000485397 SFNP31947 248 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 GPC3P51654 580 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 JAK3P52333 1124 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 COASYQ13057 564 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 RNF135Q8IUD6 432 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 TRIM22Q8IYM9 498 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 SMRP1Q8NCR6 262 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 PCDHA4Q9UN74 947 aa21.7■■□□□ 1.06
COL27A1-205ENST00000485397 FSCN2O14926 492 aa21.69■■□□□ 1.06
COL27A1-205ENST00000485397 PSMD10O75832 226 aa21.69■■□□□ 1.06
COL27A1-205ENST00000485397 LAG3P18627 525 aa21.69■■□□□ 1.06
COL27A1-205ENST00000485397 HOXD11P31277 338 aaPredicted RBP21.69■■□□□ 1.06
COL27A1-205ENST00000485397 TBC1D8BQ0IIM8 1120 aa21.69■■□□□ 1.06
COL27A1-205ENST00000485397 DRP2Q13474 957 aa21.69■■□□□ 1.06
COL27A1-205ENST00000485397 TARBP2Q15633 366 aaKnown RBP21.69■■□□□ 1.06
COL27A1-205ENST00000485397 Q4G0T1 1027 aa21.69■■□□□ 1.06
COL27A1-205ENST00000485397 MIER3Q7Z3K6 550 aa21.69■■□□□ 1.06
COL27A1-205ENST00000485397 ECHDC2Q86YB7 292 aa21.69■■□□□ 1.06
COL27A1-205ENST00000485397 VN1R2Q8NFZ6 395 aa21.69■■□□□ 1.06
COL27A1-205ENST00000485397 WDR81Q562E7 1941 aa21.68■■□□□ 1.06
COL27A1-205ENST00000485397 TMEM150BA6NC51 233 aa21.68■■□□□ 1.06
COL27A1-205ENST00000485397 CSDE1O75534 798 aaKnown RBP21.68■■□□□ 1.06
COL27A1-205ENST00000485397 DARSP14868 501 aaKnown RBP21.68■■□□□ 1.06
COL27A1-205ENST00000485397 DUSP6Q16828 381 aa21.68■■□□□ 1.06
COL27A1-205ENST00000485397 BLIDQ8IZY5 108 aa21.68■■□□□ 1.06
COL27A1-205ENST00000485397 RNF169Q8NCN4 708 aa21.68■■□□□ 1.06
COL27A1-205ENST00000485397 MRPS27Q92552 414 aaKnown RBP21.68■■□□□ 1.06
COL27A1-205ENST00000485397 SCLT1Q96NL6 688 aa21.68■■□□□ 1.06
COL27A1-205ENST00000485397 AIFM3Q96NN9 605 aa21.68■■□□□ 1.06
COL27A1-205ENST00000485397 C22orf23Q9BZE7 217 aa21.68■■□□□ 1.06
COL27A1-205ENST00000485397 USP15Q9Y4E8 981 aaPredicted RBP21.68■■□□□ 1.06
COL27A1-205ENST00000485397 CYP46A1Q9Y6A2 500 aa21.68■■□□□ 1.06
COL27A1-205ENST00000485397 CYP3A7-CYP3A51PA0A087WV96 503 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 M0R2N6 131 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 CPLX1O14810 134 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 HOXA2O43364 376 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 STBD1O95210 358 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 DEXIO95424 95 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 CYP3A7P24462 503 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 PBX3P40426 434 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 PLCB3Q01970 1234 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 STK3Q13188 491 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 NPY5RQ15761 445 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 MTERF2Q49AM1 385 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 HERC4Q5GLZ8 1057 aaPredicted RBP21.67■■□□□ 1.06
COL27A1-205ENST00000485397 PLPP4Q5VZY2 271 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 KCNT2Q6UVM3 1135 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 B3GNT9Q6UX72 402 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 ZNF710Q8N1W2 664 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 NLRP7Q8WX94 980 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 ZNF274Q96GC6 653 aaPredicted RBP21.67■■□□□ 1.06
COL27A1-205ENST00000485397 SH2D3AQ9BRG2 576 aa21.67■■□□□ 1.06
COL27A1-205ENST00000485397 SEPT9Q9UHD8 586 aaPredicted RBP21.67■■□□□ 1.06
COL27A1-205ENST00000485397 XKR3Q5GH77 459 aa21.66■■□□□ 1.06
COL27A1-205ENST00000485397 CLLU1OSQ5K130 101 aa21.66■■□□□ 1.06
COL27A1-205ENST00000485397 PDE12Q6L8Q7 609 aaKnown RBP21.66■■□□□ 1.06
COL27A1-205ENST00000485397 ABI1Q8IZP0 508 aa21.66■■□□□ 1.06
COL27A1-205ENST00000485397 LRRC43Q8N309 656 aa21.66■■□□□ 1.06
COL27A1-205ENST00000485397 RDM1Q8NG50 284 aa21.66■■□□□ 1.06
COL27A1-205ENST00000485397 CEP89Q96ST8 783 aa21.66■■□□□ 1.06
COL27A1-205ENST00000485397 CDCA3Q99618 268 aaPredicted RBP21.66■■□□□ 1.06
COL27A1-205ENST00000485397 NIFKQ9BYG3 293 aaKnown RBP21.66■■□□□ 1.06
COL27A1-205ENST00000485397 LZTS1Q9Y250 596 aa21.66■■□□□ 1.06
COL27A1-205ENST00000485397 LOC730098B7Z3J9 87 aa21.65■■□□□ 1.06
COL27A1-205ENST00000485397 EPB41L2O43491 1005 aaKnown RBP21.65■■□□□ 1.06
COL27A1-205ENST00000485397 HFE2Q6ZVN8 426 aa21.65■■□□□ 1.06
COL27A1-205ENST00000485397 ZNF598Q86UK7 904 aaKnown RBP21.65■■□□□ 1.06
COL27A1-205ENST00000485397 DAGLBQ8NCG7 672 aa21.65■■□□□ 1.06
COL27A1-205ENST00000485397 ETNPPLQ8TBG4 499 aa21.65■■□□□ 1.06
COL27A1-205ENST00000485397 MBOAT7Q96N66 472 aa21.65■■□□□ 1.06
COL27A1-205ENST00000485397 ZNF558Q96NG5 402 aa21.65■■□□□ 1.06
COL27A1-205ENST00000485397 TCF25Q9BQ70 676 aa21.65■■□□□ 1.06
COL27A1-205ENST00000485397 PUF60Q9UHX1 559 aaKnown RBP21.65■■□□□ 1.06
COL27A1-205ENST00000485397 A0A0U1RQF3 1178 aa21.64■■□□□ 1.05
COL27A1-205ENST00000485397 HIDE1A8MVS5 230 aa21.64■■□□□ 1.05
COL27A1-205ENST00000485397 ATF7P17544 494 aaPredicted RBP21.64■■□□□ 1.05
COL27A1-205ENST00000485397 HELQQ8TDG4 1101 aa21.64■■□□□ 1.05
COL27A1-205ENST00000485397 GCOM2Q9BZD3 368 aaPredicted RBP21.64■■□□□ 1.05
COL27A1-205ENST00000485397 TM6SF1Q9BZW5 370 aa21.64■■□□□ 1.05
COL27A1-205ENST00000485397 ENTPD7Q9NQZ7 604 aa21.64■■□□□ 1.05
COL27A1-205ENST00000485397 KCNJ14Q9UNX9 436 aa21.64■■□□□ 1.05
COL27A1-205ENST00000485397 MUC6Q6W4X9 2439 aa21.64■■□□□ 1.05
COL27A1-205ENST00000485397 A0A087WZ62 844 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 IGKV6-21A0A0C4DH24 114 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 DDX11L8A8MPP1 907 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 KCNC3Q14003 757 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 NONOQ15233 471 aaKnown RBP eCLIP21.63■■□□□ 1.05
COL27A1-205ENST00000485397 INF2Q27J81 1249 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 CPLX2Q6PUV4 134 aaKnown RBP21.63■■□□□ 1.05
COL27A1-205ENST00000485397 MOXD1Q6UVY6 613 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 SUSD6Q92537 303 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 EDAQ92838 391 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 RPGRIP1Q96KN7 1286 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 FDXACB1Q9BRP7 624 aaPredicted RBP21.63■■□□□ 1.05
COL27A1-205ENST00000485397 PHF7Q9BWX1 381 aaPredicted RBP21.63■■□□□ 1.05
COL27A1-205ENST00000485397 PDRG1Q9NUG6 133 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 SPG21Q9NZD8 308 aa21.63■■□□□ 1.05
COL27A1-205ENST00000485397 DDX25Q9UHL0 483 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms