RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 LRFN2Q9ULH4 789 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 NOL7Q9UMY1 257 aaKnown RBP13.3□□□□□ -0.28
HMGN1-213ENST00000482192 RWDD3Q9Y3V2 267 aa13.3□□□□□ -0.28
HMGN1-213ENST00000482192 MGEA5O60502 916 aa13.29□□□□□ -0.28
HMGN1-213ENST00000482192 SLITRK3O94933 977 aa13.29□□□□□ -0.28
HMGN1-213ENST00000482192 LYPLA2O95372 231 aa13.29□□□□□ -0.28
HMGN1-213ENST00000482192 U2AF2P26368 475 aaKnown RBP eCLIP13.29□□□□□ -0.288e-8■■■■■ 35
HMGN1-213ENST00000482192 NPEPPSP55786 919 aa13.29□□□□□ -0.28
HMGN1-213ENST00000482192 ZNF410Q86VK4 478 aa13.29□□□□□ -0.28
HMGN1-213ENST00000482192 RHPN2Q8IUC4 686 aa13.29□□□□□ -0.28
HMGN1-213ENST00000482192 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
HMGN1-213ENST00000482192 CMTR2Q8IYT2 770 aaKnown RBP13.29□□□□□ -0.28
HMGN1-213ENST00000482192 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-213ENST00000482192 GCOM2Q9BZD3 368 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-213ENST00000482192 TMEM60Q9H2L4 133 aa13.29□□□□□ -0.28
HMGN1-213ENST00000482192 DHX33Q9H6R0 707 aaKnown RBP13.29□□□□□ -0.28
HMGN1-213ENST00000482192 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-213ENST00000482192 PCDHB7Q9Y5E2 793 aa13.29□□□□□ -0.28
HMGN1-213ENST00000482192 POTEMA6NI47 508 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 C9IYK1 514 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 H3BNC9 293 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
HMGN1-213ENST00000482192 OR52Z1P0C646 297 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 ZSCAN20P17040 1043 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-213ENST00000482192 DSC3Q14574 896 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 ZNF174Q15697 407 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 PTPROQ16827 1216 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 XKR9Q5GH70 373 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
HMGN1-213ENST00000482192 CLP1Q92989 425 aaKnown RBP13.28□□□□□ -0.28
HMGN1-213ENST00000482192 THEGQ9P2T0 379 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 WDR81Q562E7 1941 aa13.28□□□□□ -0.28
HMGN1-213ENST00000482192 CHD9Q3L8U1 2897 aa13.27□□□□□ -0.28
HMGN1-213ENST00000482192 A0A087WZ62 844 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 C5orf67F2Z3F1 127 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 RB1P06400 928 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 LINC00271P0C7V0 271 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 IBSPP21815 317 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 SFPQP23246 707 aaKnown RBP eCLIP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 GJB2P29033 226 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 CTNNB1P35222 781 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 BMPR1AP36894 532 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 GPM6BQ13491 265 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 EMC2Q15006 297 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 SKIV2LQ15477 1246 aaKnown RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 ERMNQ8TAM6 284 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 ATXN2LQ8WWM7 1075 aaKnown RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 TCP11Q8WWU5 503 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 PSPC1Q8WXF1 523 aaKnown RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 NLRP4Q96MN2 994 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 CCDC43Q96MW1 224 aaKnown RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 FDXACB1Q9BRP7 624 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 C11orf84Q9BUA3 381 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 BACH2Q9BYV9 841 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 INO80BQ9C086 356 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 RNF39Q9H2S5 420 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 ELAC1Q9H777 363 aaKnown RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 ANKEF1Q9NU02 776 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 TMEM161AQ9NX61 479 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 COL4A3BPQ9Y5P4 624 aa13.27□□□□□ -0.29
HMGN1-213ENST00000482192 MRPL42Q9Y6G3 142 aaKnown RBP13.27□□□□□ -0.29
HMGN1-213ENST00000482192 COL6A3P12111 3177 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 ZBTB39O15060 712 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 XRCC6P12956 609 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGN1-213ENST00000482192 TECP42680 631 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 FAM189BP81408 668 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 PAN2Q504Q3 1202 aaKnown RBP13.26□□□□□ -0.29
HMGN1-213ENST00000482192 KSR1Q8IVT5 923 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 PRPF31Q8WWY3 499 aaKnown RBP13.26□□□□□ -0.29
HMGN1-213ENST00000482192 TMEM143Q96AN5 459 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 MRPL38Q96DV4 380 aaKnown RBP13.26□□□□□ -0.29
HMGN1-213ENST00000482192 MTRQ99707 1265 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 PLVAPQ9BX97 442 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 ATP6V0A4Q9HBG4 840 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 TUFT1Q9NNX1 390 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 PRDM6Q9NQX0 595 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 CHST12Q9NRB3 414 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-213ENST00000482192 DACT1Q9NYF0 836 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 SMC3Q9UQE7 1217 aa13.26□□□□□ -0.29
HMGN1-213ENST00000482192 TTC3P53804 2025 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 H3BQV1 296 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 LAD1O00515 517 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 DLL1O00548 723 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 ASAP2O43150 1006 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 HOXA2O43364 376 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 CSDE1O75534 798 aaKnown RBP13.25□□□□□ -0.29
HMGN1-213ENST00000482192 DGAT1O75907 488 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 SPATA31C1P0DKV0 1188 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 FGFR4P22455 802 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 RARRES1P49788 294 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 GATMP50440 423 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 TOB1P50616 345 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-213ENST00000482192 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
HMGN1-213ENST00000482192 LAMTOR4Q0VGL1 99 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 TIGD5Q53EQ6 642 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 HAUS3Q68CZ6 603 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 MCTP1Q6DN14 999 aa13.25□□□□□ -0.29
HMGN1-213ENST00000482192 FERMT3Q86UX7 667 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms