RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 MRPS27Q92552 414 aaKnown RBP14.95□□□□□ -0.02
VCL-205ENST00000478896 KCNB2Q92953 911 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 LENG9Q96B70 501 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 RPGRIP1Q96KN7 1286 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 FBXL18Q96ME1 805 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 ZNF558Q96NG5 402 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 PHF7Q9BWX1 381 aaPredicted RBP14.95□□□□□ -0.02
VCL-205ENST00000478896 KCNH6Q9H252 994 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 FSCN2O14926 492 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 ZNF862O60290 1169 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 REC8O95072 547 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 IFNAR1P17181 557 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 EIF4BP23588 611 aaKnown RBP14.94□□□□□ -0.02
VCL-205ENST00000478896 CA8P35219 290 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 TECP42680 631 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 GPC3P51654 580 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 FAM189BP81408 668 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 PLCB3Q01970 1234 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 KRT17Q04695 432 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 UGCGQ16739 394 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 LLGL2Q6P1M3 1020 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 MIER3Q7Z3K6 550 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 ECHDC2Q86YB7 292 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 EDAQ92838 391 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 CASD1Q96PB1 797 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 C22orf23Q9BZE7 217 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 ADAMTS10Q9H324 1103 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 UNC45AQ9H3U1 944 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 NCOA5Q9HCD5 579 aaKnown RBP14.94□□□□□ -0.02
VCL-205ENST00000478896 SEPT9Q9UHD8 586 aaPredicted RBP14.94□□□□□ -0.02
VCL-205ENST00000478896 LZTS1Q9Y250 596 aa14.94□□□□□ -0.02
VCL-205ENST00000478896 LOC730098B7Z3J9 87 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 FGFR4P22455 802 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 PBX3P40426 434 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 USP11P51784 963 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 NHLH1Q02575 133 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 NTRK3Q16288 839 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 MTERF2Q49AM1 385 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 KCNT2Q6UVM3 1135 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 FBXL16Q8N461 479 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 LINC01465Q8N7H1 131 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 VN1R2Q8NFZ6 395 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 TBCKQ8TEA7 893 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 GJA10Q969M2 543 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 RIT2Q99578 217 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 AGXT2Q9BYV1 514 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 SH3GLB2Q9NR46 395 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 DACT1Q9NYF0 836 aa14.93□□□□□ -0.02
VCL-205ENST00000478896 CPLX1O14810 134 aa14.92□□□□□ -0.02
VCL-205ENST00000478896 DARSP14868 501 aaKnown RBP14.92□□□□□ -0.02
VCL-205ENST00000478896 ATF7P17544 494 aaPredicted RBP14.92□□□□□ -0.02
VCL-205ENST00000478896 PDIA3P30101 505 aaKnown RBP14.92□□□□□ -0.02
VCL-205ENST00000478896 SSRP1Q08945 709 aaKnown RBP14.92□□□□□ -0.02
VCL-205ENST00000478896 LRRC55Q6ZSA7 311 aa14.92□□□□□ -0.02
VCL-205ENST00000478896 TMC7Q7Z402 723 aa14.92□□□□□ -0.02
VCL-205ENST00000478896 SUGP1Q8IWZ8 645 aaKnown RBP14.92□□□□□ -0.02
VCL-205ENST00000478896 HELQQ8TDG4 1101 aa14.92□□□□□ -0.02
VCL-205ENST00000478896 SLC5A5Q92911 643 aa14.92□□□□□ -0.02
VCL-205ENST00000478896 APOL5Q9BWW9 433 aa14.92□□□□□ -0.02
VCL-205ENST00000478896 NGRNQ9NPE2 291 aaKnown RBP14.92□□□□□ -0.02
VCL-205ENST00000478896 RNF19AQ9NV58 838 aa14.92□□□□□ -0.02
VCL-205ENST00000478896 PCDHA4Q9UN74 947 aa14.92□□□□□ -0.02
VCL-205ENST00000478896 TECTAO75443 2155 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 TMEM221A6NGB7 291 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 M0R296 226 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 SFPQP23246 707 aaKnown RBP eCLIP14.91□□□□□ -0.02
VCL-205ENST00000478896 SP100P23497 879 aaPredicted RBP14.91□□□□□ -0.02
VCL-205ENST00000478896 MRE11P49959 708 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 ZXDAP98168 799 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 BMS1Q14692 1282 aaKnown RBP14.91□□□□□ -0.02
VCL-205ENST00000478896 CBX2Q14781 532 aaPredicted RBP14.91□□□□□ -0.02
VCL-205ENST00000478896 CLLU1OSQ5K130 101 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 ANKRD54Q6NXT1 300 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 TRIM67Q6ZTA4 783 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 ZBTB33Q86T24 672 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 RDM1Q8NG50 284 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 SUSD6Q92537 303 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 PBXIP1Q96AQ6 731 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 MRPL9Q9BYD2 267 aaKnown RBP14.91□□□□□ -0.02
VCL-205ENST00000478896 GCOM2Q9BZD3 368 aaPredicted RBP14.91□□□□□ -0.02
VCL-205ENST00000478896 SPG21Q9NZD8 308 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 MUC6Q6W4X9 2439 aa14.91□□□□□ -0.02
VCL-205ENST00000478896 A0A0U1RQF3 1178 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 HIDE1A8MVS5 230 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 CSDE1O75534 798 aaKnown RBP14.9□□□□□ -0.02
VCL-205ENST00000478896 DEXIO95424 95 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 TDP2O95551 362 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 EOMESO95936 686 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 DNM2P50570 870 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 DRP2Q13474 957 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 SMC1AQ14683 1233 aaKnown RBP14.9□□□□□ -0.02
VCL-205ENST00000478896 Q4G0T1 1027 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 XKR3Q5GH77 459 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 TWF2Q6IBS0 349 aaKnown RBP14.9□□□□□ -0.02
VCL-205ENST00000478896 CPLX2Q6PUV4 134 aaKnown RBP14.9□□□□□ -0.02
VCL-205ENST00000478896 RUFY3Q7L099 469 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 BLIDQ8IZY5 108 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 CASP10Q92851 521 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 SH2D3AQ9BRG2 576 aa14.9□□□□□ -0.02
VCL-205ENST00000478896 C5orf42Q9H799 3197 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms