RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 HSD17B14Q9BPX1 270 aa26.26■■□□□ 1.79
C9orf3-215ENST00000478473 DHX33Q9H6R0 707 aaKnown RBP26.26■■□□□ 1.79
C9orf3-215ENST00000478473 MARCH6O60337 910 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 NEMFO60524 1076 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 DNM2P50570 870 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 CALCRLQ16602 461 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 PTPROQ16827 1216 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 ZNF410Q86VK4 478 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 P2RX5Q93086 422 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 PPP1R16BQ96T49 567 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 LXNQ9BS40 222 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 C11orf84Q9BUA3 381 aaPredicted RBP26.25■■□□□ 1.79
C9orf3-215ENST00000478473 LMAN2LQ9H0V9 348 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 ZSWIM4Q9H7M6 989 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 TMEM161AQ9NX61 479 aa26.25■■□□□ 1.79
C9orf3-215ENST00000478473 DENND3A2RUS2 1198 aa26.24■■□□□ 1.79
C9orf3-215ENST00000478473 SLITRK3O94933 977 aa26.24■■□□□ 1.79
C9orf3-215ENST00000478473 NAALADL2Q58DX5 795 aa26.24■■□□□ 1.79
C9orf3-215ENST00000478473 NEK9Q8TD19 979 aa26.24■■□□□ 1.79
C9orf3-215ENST00000478473 RGL1Q9NZL6 768 aa26.24■■□□□ 1.79
C9orf3-215ENST00000478473 PCDHB7Q9Y5E2 793 aa26.24■■□□□ 1.79
C9orf3-215ENST00000478473 YWHABP31946 246 aaKnown RBP26.23■■□□□ 1.79
C9orf3-215ENST00000478473 RFC5P40937 340 aa26.23■■□□□ 1.79
C9orf3-215ENST00000478473 AAK1Q2M2I8 961 aa26.23■■□□□ 1.79
C9orf3-215ENST00000478473 SH2D3AQ9BRG2 576 aa26.23■■□□□ 1.79
C9orf3-215ENST00000478473 TRAIPQ9BWF2 469 aa26.23■■□□□ 1.79
C9orf3-215ENST00000478473 TTC12Q9H892 705 aaPredicted RBP26.23■■□□□ 1.79
C9orf3-215ENST00000478473 LRFN2Q9ULH4 789 aa26.23■■□□□ 1.79
C9orf3-215ENST00000478473 MRPL42Q9Y6G3 142 aaKnown RBP26.23■■□□□ 1.79
C9orf3-215ENST00000478473 GAS2O43903 313 aaKnown RBP26.22■■□□□ 1.79
C9orf3-215ENST00000478473 CTNNB1P35222 781 aa26.22■■□□□ 1.79
C9orf3-215ENST00000478473 NPEPPSP55786 919 aa26.22■■□□□ 1.79
C9orf3-215ENST00000478473 COL19A1Q14993 1142 aa26.22■■□□□ 1.79
C9orf3-215ENST00000478473 TIGD5Q53EQ6 642 aa26.22■■□□□ 1.79
C9orf3-215ENST00000478473 PLA2G4FQ68DD2 849 aa26.22■■□□□ 1.79
C9orf3-215ENST00000478473 NCAPH2Q6IBW4 605 aa26.22■■□□□ 1.79
C9orf3-215ENST00000478473 OTUD6AQ7L8S5 288 aa26.22■■□□□ 1.79
C9orf3-215ENST00000478473 ZNF579Q8NAF0 562 aaKnown RBP26.22■■□□□ 1.79
C9orf3-215ENST00000478473 HLA-CQ95604 372 aa26.22■■□□□ 1.79
C9orf3-215ENST00000478473 DYDC2Q96IM9 177 aa26.22■■□□□ 1.79
C9orf3-215ENST00000478473 EIF2AK1Q9BQI3 630 aaKnown RBP26.22■■□□□ 1.79
C9orf3-215ENST00000478473 GCOM2Q9BZD3 368 aaPredicted RBP26.22■■□□□ 1.79
C9orf3-215ENST00000478473 SUCLA2Q9P2R7 463 aaPredicted RBP26.22■■□□□ 1.79
C9orf3-215ENST00000478473 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.21■■□□□ 1.79
C9orf3-215ENST00000478473 TRAPPC10P48553 1259 aa26.21■■□□□ 1.79
C9orf3-215ENST00000478473 FOSBP53539 338 aa26.21■■□□□ 1.79
C9orf3-215ENST00000478473 GUCY1B3Q02153 619 aa26.21■■□□□ 1.79
C9orf3-215ENST00000478473 SLC7A3Q8WY07 619 aa26.21■■□□□ 1.79
C9orf3-215ENST00000478473 CEP170P1Q96L14 293 aa26.21■■□□□ 1.79
C9orf3-215ENST00000478473 TMEM60Q9H2L4 133 aa26.21■■□□□ 1.79
C9orf3-215ENST00000478473 CHST12Q9NRB3 414 aa26.21■■□□□ 1.79
C9orf3-215ENST00000478473 BRWD1Q9NSI6 2320 aa26.21■■□□□ 1.79
C9orf3-215ENST00000478473 MUC3AQ02505 3323 aa26.2■■□□□ 1.79
C9orf3-215ENST00000478473 ST18O60284 1047 aa26.2■■□□□ 1.78
C9orf3-215ENST00000478473 BMP1P13497 986 aa26.2■■□□□ 1.78
C9orf3-215ENST00000478473 U2AF2P26368 475 aaKnown RBP eCLIP26.2■■□□□ 1.783e-8■□□□□ 10.3
C9orf3-215ENST00000478473 SKIV2LQ15477 1246 aaKnown RBP26.2■■□□□ 1.78
C9orf3-215ENST00000478473 FAM184AQ8NB25 1140 aa26.2■■□□□ 1.78
C9orf3-215ENST00000478473 NLRP7Q8WX94 980 aa26.2■■□□□ 1.78
C9orf3-215ENST00000478473 INO80BQ9C086 356 aaPredicted RBP26.2■■□□□ 1.78
C9orf3-215ENST00000478473 UPF2Q9HAU5 1272 aaKnown RBP26.2■■□□□ 1.78
C9orf3-215ENST00000478473 A0A087WZ62 844 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 A0A0U1RQF3 1178 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 XRCC6P12956 609 aaKnown RBP eCLIP26.19■■□□□ 1.78
C9orf3-215ENST00000478473 ZSCAN20P17040 1043 aaPredicted RBP26.19■■□□□ 1.78
C9orf3-215ENST00000478473 TXKP42681 527 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 GATMP50440 423 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 CTTNQ14247 550 aaKnown RBP26.19■■□□□ 1.78
C9orf3-215ENST00000478473 NOSTRINQ8IVI9 506 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 TBC1D32Q96NH3 1257 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 FDXACB1Q9BRP7 624 aaPredicted RBP26.19■■□□□ 1.78
C9orf3-215ENST00000478473 ATP6V0A4Q9HBG4 840 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 IFT122Q9HBG6 1241 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 ANKEF1Q9NU02 776 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 RNF19AQ9NV58 838 aa26.19■■□□□ 1.78
C9orf3-215ENST00000478473 FNDC1Q4ZHG4 1894 aaPredicted RBP26.19■■□□□ 1.78
C9orf3-215ENST00000478473 GRM6O15303 877 aa26.18■■□□□ 1.78
C9orf3-215ENST00000478473 HOXA2O43364 376 aa26.18■■□□□ 1.78
C9orf3-215ENST00000478473 CYP4A11Q02928 519 aa26.18■■□□□ 1.78
C9orf3-215ENST00000478473 TFF2Q03403 129 aa26.18■■□□□ 1.78
C9orf3-215ENST00000478473 FAM102BQ5T8I3 360 aa26.18■■□□□ 1.78
C9orf3-215ENST00000478473 ZNF598Q86UK7 904 aaKnown RBP26.18■■□□□ 1.78
C9orf3-215ENST00000478473 ECHDC2Q86YB7 292 aa26.18■■□□□ 1.78
C9orf3-215ENST00000478473 RHPN2Q8IUC4 686 aa26.18■■□□□ 1.78
C9orf3-215ENST00000478473 ZNF668Q96K58 619 aaPredicted RBP26.18■■□□□ 1.78
C9orf3-215ENST00000478473 PLAGL2Q9UPG8 496 aa26.18■■□□□ 1.78
C9orf3-215ENST00000478473 ZBTB39O15060 712 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 EOMESO95936 686 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 POLGP54098 1239 aaPredicted RBP26.17■■□□□ 1.78
C9orf3-215ENST00000478473 CAMK1Q14012 370 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 TPH2Q8IWU9 490 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 TCP11Q8WWU5 503 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 SCLT1Q96NL6 688 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 TMEM117Q9H0C3 514 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 NSUN3Q9H649 340 aaKnown RBP26.17■■□□□ 1.78
C9orf3-215ENST00000478473 DACT1Q9NYF0 836 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 COL4A3BPQ9Y5P4 624 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 NCOR1O75376 2440 aa26.17■■□□□ 1.78
C9orf3-215ENST00000478473 ASAP2O43150 1006 aa26.16■■□□□ 1.78
C9orf3-215ENST00000478473 SFPQP23246 707 aaKnown RBP eCLIP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms