RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 TMEM192Q8IY95 271 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 ZNF710Q8N1W2 664 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 ZSWIM4Q9H7M6 989 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 ADGRA3Q8IWK6 1321 aa17.43■□□□□ 0.38
COMMD6-209ENST00000477377 A0A087WZ62 844 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 POTEMA6NI47 508 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 C5orf67F2Z3F1 127 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 H3BNC9 293 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 MARCH6O60337 910 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 CSDE1O75534 798 aaKnown RBP17.42■□□□□ 0.38
COMMD6-209ENST00000477377 TPH2Q8IWU9 490 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 FBXO22Q8NEZ5 403 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 CEP170P1Q96L14 293 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 FDXACB1Q9BRP7 624 aaPredicted RBP17.42■□□□□ 0.38
COMMD6-209ENST00000477377 UPF2Q9HAU5 1272 aaKnown RBP17.42■□□□□ 0.38
COMMD6-209ENST00000477377 IFT122Q9HBG6 1241 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 XPNPEP1Q9NQW7 623 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 RNF19AQ9NV58 838 aa17.42■□□□□ 0.38
COMMD6-209ENST00000477377 SUCLA2Q9P2R7 463 aaPredicted RBP17.42■□□□□ 0.38
COMMD6-209ENST00000477377 A0A087WWV3 80 aa17.41■□□□□ 0.38
COMMD6-209ENST00000477377 DKC1O60832 514 aaKnown RBP eCLIP17.41■□□□□ 0.38
COMMD6-209ENST00000477377 FAM102BQ5T8I3 360 aa17.41■□□□□ 0.38
COMMD6-209ENST00000477377 SLC24A5Q71RS6 500 aa17.41■□□□□ 0.38
COMMD6-209ENST00000477377 CMTR2Q8IYT2 770 aaKnown RBP17.41■□□□□ 0.38
COMMD6-209ENST00000477377 FIBCD1Q8N539 461 aa17.41■□□□□ 0.38
COMMD6-209ENST00000477377 SAMD11Q96NU1 681 aa17.41■□□□□ 0.38
COMMD6-209ENST00000477377 C1orf112Q9NSG2 853 aa17.41■□□□□ 0.38
COMMD6-209ENST00000477377 PPME1Q9Y570 386 aa17.41■□□□□ 0.38
COMMD6-209ENST00000477377 MRPL42Q9Y6G3 142 aaKnown RBP17.41■□□□□ 0.38
COMMD6-209ENST00000477377 NLRC5Q86WI3 1866 aa17.41■□□□□ 0.38
COMMD6-209ENST00000477377 GTPBP6O43824 516 aaPredicted RBP17.4■□□□□ 0.38
COMMD6-209ENST00000477377 MED24O75448 989 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 BMPR1AP36894 532 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 TRAPPC10P48553 1259 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 MCM2P49736 904 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 ORC2Q13416 577 aaPredicted RBP17.4■□□□□ 0.38
COMMD6-209ENST00000477377 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 ODR4Q5SWX8 454 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 CATSPER3Q86XQ3 398 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 MICALL1Q8N3F8 863 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 NLRP7Q8WX94 980 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 TMEM143Q96AN5 459 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 COL25A1Q9BXS0 654 aaPredicted RBP17.4■□□□□ 0.38
COMMD6-209ENST00000477377 PCDHB6Q9Y5E3 794 aa17.4■□□□□ 0.38
COMMD6-209ENST00000477377 RALGAPA2Q2PPJ7 1873 aa17.39■□□□□ 0.38
COMMD6-209ENST00000477377 OR52Z1P0C646 297 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 STAG3L1P0CL83 205 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 GJB2P29033 226 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 RFC5P40937 340 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 TECP42680 631 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 RARRES1P49788 294 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 CDC42EP1Q00587 391 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 CAMK1Q14012 370 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 BTG3Q14201 252 aaPredicted RBP17.39■□□□□ 0.37
COMMD6-209ENST00000477377 IL17AQ16552 155 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 XKR9Q5GH70 373 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 ZNF598Q86UK7 904 aaKnown RBP17.39■□□□□ 0.37
COMMD6-209ENST00000477377 ZNF410Q86VK4 478 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 RHPN2Q8IUC4 686 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 NEK9Q8TD19 979 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 ELAC1Q9H777 363 aaKnown RBP17.39■□□□□ 0.37
COMMD6-209ENST00000477377 MINDY3Q9H8M7 445 aa17.39■□□□□ 0.37
COMMD6-209ENST00000477377 BMP2KQ9NSY1 1161 aaPredicted RBP17.39■□□□□ 0.37
COMMD6-209ENST00000477377 FNDC1Q4ZHG4 1894 aaPredicted RBP17.39■□□□□ 0.37
COMMD6-209ENST00000477377 ARID2Q68CP9 1835 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 DENND3A2RUS2 1198 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 RB1P06400 928 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 ATF7P17544 494 aaPredicted RBP17.38■□□□□ 0.37
COMMD6-209ENST00000477377 DNM2P50570 870 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 GPM6BQ13491 265 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 CUL4AQ13619 759 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 EMC2Q15006 297 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 ECM1Q16610 540 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 OTUD6AQ7L8S5 288 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 PRPF31Q8WWY3 499 aaKnown RBP17.38■□□□□ 0.37
COMMD6-209ENST00000477377 SLC7A3Q8WY07 619 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 JPH2Q9BR39 696 aaPredicted RBP17.38■□□□□ 0.37
COMMD6-209ENST00000477377 GCOM2Q9BZD3 368 aaPredicted RBP17.38■□□□□ 0.37
COMMD6-209ENST00000477377 ANKEF1Q9NU02 776 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 TMEM161AQ9NX61 479 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 HCSTQ9UBK5 93 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 PCDHB7Q9Y5E2 793 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 COL4A3BPQ9Y5P4 624 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 MUC3AQ02505 3323 aa17.38■□□□□ 0.37
COMMD6-209ENST00000477377 KIAA1671Q9BY89 1806 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 ATG2AQ2TAZ0 1938 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 A0A0U1RQF3 1178 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 DLL1O00548 723 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 GRM6O15303 877 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 FGFR1P11362 822 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 XRCC6P12956 609 aaKnown RBP eCLIP17.37■□□□□ 0.37
COMMD6-209ENST00000477377 POLGP54098 1239 aaPredicted RBP17.37■□□□□ 0.37
COMMD6-209ENST00000477377 LAMTOR4Q0VGL1 99 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 PAN2Q504Q3 1202 aaKnown RBP17.37■□□□□ 0.37
COMMD6-209ENST00000477377 LRRC55Q6ZSA7 311 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 FERMT3Q86UX7 667 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 ECHDC2Q86YB7 292 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 PIGOQ8TEQ8 1089 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 ATXN2LQ8WWM7 1075 aaKnown RBP17.37■□□□□ 0.37
COMMD6-209ENST00000477377 MRPL38Q96DV4 380 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms