RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 TANGO6Q9C0B7 1094 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 MROH8Q9H579 483 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 CBX8Q9HC52 389 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 LRRC4CQ9HCJ2 640 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 IL1RAPL2Q9NP60 686 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 DCP1AQ9NPI6 582 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 ECHDC1Q9NTX5 307 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 KIAA1522Q9P206 1035 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-206ENST00000476045 VAV3Q9UKW4 847 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 OGDHLQ9ULD0 1010 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 PLAGL2Q9UPG8 496 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 SLC5A6Q9Y289 635 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 TTC41PQ6P2S7 1318 aa4.97□□□□□ -1.61
VPS13D-206ENST00000476045 SMCHD1A6NHR9 2005 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 MPHOSPH10O00566 681 aaKnown RBP4.96□□□□□ -1.62
VPS13D-206ENST00000476045 ERC2O15083 957 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 RNGTTO60942 597 aaKnown RBP4.96□□□□□ -1.62
VPS13D-206ENST00000476045 LRIG2O94898 1065 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 SLC25A27O95847 323 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 EOMESO95936 686 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 ZNF16P17020 682 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-206ENST00000476045 FUT4P22083 530 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 NT5C2P49902 561 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 DAB2P98082 770 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 INPP5AQ14642 412 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 RRP1BQ14684 758 aaKnown RBP4.96□□□□□ -1.62
VPS13D-206ENST00000476045 L1TD1Q5T7N2 865 aaKnown RBP4.96□□□□□ -1.62
VPS13D-206ENST00000476045 OLFML2BQ68BL8 750 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 TTBK2Q6IQ55 1244 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 SPRED2Q7Z698 418 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 SIRT2Q8IXJ6 389 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 LCORLQ8N3X6 602 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 TOP6BLQ8N6T0 577 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 APPBP2Q92624 585 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 P2RX7Q99572 595 aaKnown RBP4.96□□□□□ -1.62
VPS13D-206ENST00000476045 NOC4LQ9BVI4 516 aaKnown RBP4.96□□□□□ -1.62
VPS13D-206ENST00000476045 PRO3102Q9H379 93 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 C11orf49Q9H6J7 331 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 RPAP3Q9H6T3 665 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-206ENST00000476045 VCPKMTQ9H867 229 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 KANSL2Q9H9L4 492 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 TXNRD2Q9NNW7 524 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 RNF19AQ9NV58 838 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 HOXC10Q9NYD6 342 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 GJD2Q9UKL4 321 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 PCDHA4Q9UN74 947 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 MAPK8IP1Q9UQF2 711 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 SNX11Q9Y5W9 270 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 MYO9BQ13459 2157 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 UNC80Q8N2C7 3258 aa4.96□□□□□ -1.62
VPS13D-206ENST00000476045 TANC1Q9C0D5 1861 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 GOLGA6L3A6NEY3 463 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 DCDC2CA8MYV0 355 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 KBTBD13C9JR72 458 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 DNM1LO00429 736 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 GFRA2O00451 464 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 SMARCA5O60264 1052 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 CDC45O75419 566 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 FLOT1O75955 427 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 SLC3A2P08195 630 aaKnown RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 CTSHP09668 335 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 ZNF865P0CJ78 1059 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 COL6A1P12109 1028 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 JUNBP17275 347 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 CYP2B6P20813 491 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 BMP8BP34820 402 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 PLCD1P51178 756 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 SLBPQ14493 270 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 COG2Q14746 738 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 SEPT2Q15019 361 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 ZYXQ15942 572 aaKnown RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 SBK1Q52WX2 424 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 BMP2KLQ5H9B9 411 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 C12orf60Q5U649 245 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 WDR78Q5VTH9 848 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 ZNF574Q6ZN55 896 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 ARMCX6Q7L4S7 300 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 KRTAP1-3Q8IUG1 177 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 SPACA3Q8IXA5 215 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 MSL3Q8N5Y2 521 aaKnown RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 FAM181AQ8N9Y4 354 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 KBTBD3Q8NAB2 608 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 SDR42E1Q8WUS8 393 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 MRRFQ96E11 262 aaKnown RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 PLPPR2Q96GM1 343 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 NACAP1Q9BZK3 213 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 WNT10AQ9GZT5 417 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 SPATC1LQ9H0A9 340 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 PORCNQ9H237 461 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 GOLGA2P5Q9HBQ8 144 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 RBPJLQ9UBG7 517 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 DDX20Q9UHI6 824 aaKnown RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 DIS3Q9Y2L1 958 aaKnown RBP4.95□□□□□ -1.62
VPS13D-206ENST00000476045 TMX2Q9Y320 296 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 LCTP09848 1927 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 PFASO15067 1338 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 ZMYM6O95789 1325 aa4.95□□□□□ -1.62
VPS13D-206ENST00000476045 TRANK1O15050 2925 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 PRUNE2Q8WUY3 3088 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms