RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 LINC01465Q8N7H1 131 aa12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 TMEM40Q8WWA1 233 aa12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 LINC01599Q8WXQ3 324 aa12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 HAS1Q92839 578 aa12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 SCLT1Q96NL6 688 aa12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 JPH2Q9BR39 696 aaPredicted RBP12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 NIFKQ9BYG3 293 aaKnown RBP12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 SUGCTQ9HAC7 445 aa12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 NOC2LQ9Y3T9 749 aaKnown RBP12.78□□□□□ -0.36
NUDCD3-206ENST00000475952 VPS13AQ96RL7 3174 aa12.77□□□□□ -0.36
NUDCD3-206ENST00000475952 TECTAO75443 2155 aa12.77□□□□□ -0.36
NUDCD3-206ENST00000475952 DENND3A2RUS2 1198 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 NEMFO60524 1076 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 GPR32O75388 356 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 P4HBP07237 508 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 NLRP11P59045 1033 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 BTG3Q14201 252 aaPredicted RBP12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 TARBP2Q15633 366 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 CALCRLQ16602 461 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 CSPP1Q1MSJ5 1256 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 PTCRAQ6ISU1 281 aaPredicted RBP12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 LXNQ9BS40 222 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 KCNH6Q9H252 994 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 RC3H2Q9HBD1 1191 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 C1orf112Q9NSG2 853 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 LRFN2Q9ULH4 789 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 ST3GAL5Q9UNP4 418 aa12.77□□□□□ -0.37
NUDCD3-206ENST00000475952 DDX11L8A8MPP1 907 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 EML1O00423 815 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 DGKIO75912 1065 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 CTNNB1P35222 781 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 SARSP49591 514 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 DNM2P50570 870 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 GPC3P51654 580 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 CDC42EP1Q00587 391 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 GUCY1B3Q02153 619 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 GNL2Q13823 731 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 EPHA7Q15375 998 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 PTPROQ16827 1216 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 TMEM192Q8IY95 271 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 CMTR2Q8IYT2 770 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 ZNF689Q96CS4 500 aaPredicted RBP12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 TMX1Q9H3N1 280 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 CDHR5Q9HBB8 845 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 RGS18Q9NS28 235 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 PCDHA12Q9UN75 941 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 PPME1Q9Y570 386 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 MYH15Q9Y2K3 1946 aa12.76□□□□□ -0.37
NUDCD3-206ENST00000475952 TMEM150BA6NC51 233 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 GRXCR2A6NFK2 248 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 H3BNC9 293 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 CACNA1AO00555 2505 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 DCXO43602 365 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 MAFO75444 373 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 STBD1O95210 358 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 ZSCAN20P17040 1043 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 IBSPP21815 317 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 EIF4BP23588 611 aaKnown RBP12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 POLGP54098 1239 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 SPIRE1Q08AE8 756 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 ORC2Q13416 577 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 GPM6BQ13491 265 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 PLA2G4FQ68DD2 849 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 SLC24A5Q71RS6 500 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 ANO5Q75V66 913 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 RTN4RL1Q86UN2 441 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 C4orf19Q8IY42 314 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 EXOC8Q8IYI6 725 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 KMT2EQ8IZD2 1858 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 NEK9Q8TD19 979 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 SLC7A3Q8WY07 619 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 ADAM2Q99965 735 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 SH2D3AQ9BRG2 576 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 FOXP1Q9H334 677 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 CYP26B1Q9NR63 512 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 PCDHB7Q9Y5E2 793 aa12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 ZFHX2Q9C0A1 2572 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-206ENST00000475952 IGKV6-21A0A0C4DH24 114 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 RB1P06400 928 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 SFPQP23246 707 aaKnown RBP eCLIP12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 YWHABP31946 246 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 CYP4A11Q02928 519 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 TIGD5Q53EQ6 642 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 OTUD6AQ7L8S5 288 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 ZNF410Q86VK4 478 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 CRIPAKQ8N1N5 446 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 FBXO18Q8NFZ0 1043 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 CEP170P1Q96L14 293 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 CEP89Q96ST8 783 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 C11orf84Q9BUA3 381 aaPredicted RBP12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 GCOM2Q9BZD3 368 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms