RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 MORN1Q5T089 497 aa16.08■□□□□ 0.16
HIF3A-206ENST00000472815 SPIRE2Q8WWL2 714 aa16.08■□□□□ 0.16
HIF3A-206ENST00000472815 EMID1Q96A84 441 aaPredicted RBP16.08■□□□□ 0.16
HIF3A-206ENST00000472815 ACCSQ96QU6 501 aa16.08■□□□□ 0.16
HIF3A-206ENST00000472815 FIZ1Q96SL8 496 aa16.08■□□□□ 0.16
HIF3A-206ENST00000472815 JPH2Q9BR39 696 aaPredicted RBP16.08■□□□□ 0.16
HIF3A-206ENST00000472815 METTL14Q9HCE5 456 aaKnown RBP16.08■□□□□ 0.16
HIF3A-206ENST00000472815 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
HIF3A-206ENST00000472815 TMEM150BA6NC51 233 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 SLC16A3O15427 465 aaKnown RBP16.07■□□□□ 0.16
HIF3A-206ENST00000472815 CA12O43570 354 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 HOXC6P09630 235 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 EPB41P11171 864 aaKnown RBP16.07■□□□□ 0.16
HIF3A-206ENST00000472815 PBX1P40424 430 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 RGS2P41220 211 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 PEX3P56589 373 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 TBC1D8BQ0IIM8 1120 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 PPP2R5AQ15172 486 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 HSDL1Q3SXM5 330 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 IQSEC1Q6DN90 963 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 TAPT1Q6NXT6 567 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 ZNF830Q96NB3 372 aaPredicted RBP16.07■□□□□ 0.16
HIF3A-206ENST00000472815 POLD4Q9HCU8 107 aa16.07■□□□□ 0.16
HIF3A-206ENST00000472815 CCDC169A6NNP5 214 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 TNPO2O14787 897 aaKnown RBP16.06■□□□□ 0.16
HIF3A-206ENST00000472815 PPP1R37O75864 691 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 NR3C1P04150 777 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 NCKAP1LP55160 1127 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 TBX2Q13207 712 aaPredicted RBP16.06■□□□□ 0.16
HIF3A-206ENST00000472815 CRHR2Q13324 411 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 ACVR2BQ13705 512 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 MYBPC2Q14324 1141 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 EMC2Q15006 297 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 VWA3BQ502W6 1294 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 HAUS6Q7Z4H7 955 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 FRMD5Q7Z6J6 570 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 PPTC7Q8NI37 304 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 CACTINQ8WUQ7 758 aaKnown RBP16.06■□□□□ 0.16
HIF3A-206ENST00000472815 EEF2KMTQ96G04 330 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 SH2D3AQ9BRG2 576 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 NUP58Q9BVL2 599 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 STRA6Q9BX79 667 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 KMT5AQ9NQR1 393 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 PDLIM7Q9NR12 457 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 PDGFCQ9NRA1 345 aa16.06■□□□□ 0.16
HIF3A-206ENST00000472815 SNAI1O95863 264 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 GTF2BQ00403 316 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 ZC2HC1CQ53FD0 456 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 RETREG2Q8NC44 543 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 ATP8B4Q8TF62 1192 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 CCDC51Q96ER9 411 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 PCYT2Q99447 389 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 NTPCRQ9BSD7 190 aaKnown RBP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 MKNK1Q9BUB5 465 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 KCNF1Q9H3M0 494 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 NDST4Q9H3R1 872 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 DHX33Q9H6R0 707 aaKnown RBP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 ERAP1Q9NZ08 941 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 FRMD4BQ9Y2L6 1034 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 TELO2Q9Y4R8 837 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 SKILP12757 684 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 ATP4AP20648 1035 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 HOXD13P35453 343 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 ARHGAP1Q07960 439 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 DUSP28Q4G0W2 176 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 OLFML2BQ68BL8 750 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 NPLOC4Q8TAT6 608 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 TCP11Q8WWU5 503 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 APBA2Q99767 749 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 POLR3FQ9H1D9 316 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 GPRC5CQ9NQ84 441 aa16.05■□□□□ 0.16
HIF3A-206ENST00000472815 ARMCX3Q9UH62 379 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 ZNF215Q9UL58 517 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.05■□□□□ 0.16
HIF3A-206ENST00000472815 MGAMO43451 1857 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 HBP1O60381 514 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 NPTX2P47972 431 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 HSP90AA2PQ14568 343 aaPredicted RBP16.04■□□□□ 0.16
HIF3A-206ENST00000472815 ARMCX5Q6P1M9 558 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 SLC9A9Q8IVB4 645 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 DNAJC5GQ8N7S2 189 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 TMEM174Q8WUU8 243 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 PCMTD1Q96MG8 357 aaPredicted RBP16.04■□□□□ 0.16
HIF3A-206ENST00000472815 ERGIC2Q96RQ1 377 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 KATNBL1Q9H079 304 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 ZMYM2Q9UBW7 1377 aa16.04■□□□□ 0.16
HIF3A-206ENST00000472815 DOCK3Q8IZD9 2030 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 SLC16A4O15374 487 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 TGFB1I1O43294 461 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 ZNF500O60304 480 aaPredicted RBP16.03■□□□□ 0.16
HIF3A-206ENST00000472815 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
HIF3A-206ENST00000472815 ADCYAP1R1P41586 468 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 FCGRTP55899 365 aa16.03■□□□□ 0.16
HIF3A-206ENST00000472815 MAP2K1Q02750 393 aaPredicted RBP16.03■□□□□ 0.16
HIF3A-206ENST00000472815 TARBP2Q15633 366 aaKnown RBP16.03■□□□□ 0.16
HIF3A-206ENST00000472815 TSR1Q2NL82 804 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms