RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 LRRC4BQ9NT99 713 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 DCDC2CA8MYV0 355 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
IRF1-208ENST00000472045 PDHXO00330 501 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 TCP1P17987 556 aaKnown RBP13.22□□□□□ -0.29
IRF1-208ENST00000472045 PHBP35232 272 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 RFC5P40937 340 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 PRKCEQ02156 737 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 TMEM62Q0P6H9 643 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 KCTD6Q8NC69 237 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 P3H4Q92791 437 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 CEP63Q96MT8 703 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
IRF1-208ENST00000472045 FAM217BQ9NTX9 383 aaPredicted RBP13.22□□□□□ -0.29
IRF1-208ENST00000472045 STXBP3O00186 592 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 CXCL11O14625 94 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 HBP1O60381 514 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 EHHADHQ08426 723 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 RBL2Q08999 1139 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 MUM1L1Q5H9M0 696 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 ZNF449Q6P9G9 518 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 AFG1LQ8WV93 481 aa13.22□□□□□ -0.29
IRF1-208ENST00000472045 MOV10L1Q9BXT6 1211 aaKnown RBP13.22□□□□□ -0.29
IRF1-208ENST00000472045 FAM205AQ6ZU69 1335 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 VCAM1P19320 739 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 VAMP7P51809 220 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 TTC30AQ86WT1 665 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 PHF20Q9BVI0 1012 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 PLEKHA4Q9H4M7 779 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 MKRN1Q9UHC7 482 aaKnown RBP13.21□□□□□ -0.29
IRF1-208ENST00000472045 C3P01024 1663 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 ATF2P15336 505 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 MTMR3Q13615 1198 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 TCP11X2Q5H9J9 407 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 KRT222Q8N1A0 295 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 TMEM35BQ8NCS4 154 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 CDCA5Q96FF9 252 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 KIF20BQ96Q89 1820 aa13.21□□□□□ -0.29
IRF1-208ENST00000472045 ESYT2A0FGR8 921 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 GMNNO75496 209 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 TBXAS1P24557 533 aaPredicted RBP13.21□□□□□ -0.3
IRF1-208ENST00000472045 AP3M2P53677 418 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 EPHB1P54762 984 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 LMNB2Q03252 620 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 EMC2Q15006 297 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 TMEM270Q6UE05 265 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 GPRASP2Q96D09 838 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 NGRNQ9NPE2 291 aaKnown RBP13.21□□□□□ -0.3
IRF1-208ENST00000472045 DNAJC12Q9UKB3 198 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 MAD1L1Q9Y6D9 718 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 MCF2LO15068 1137 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 ASAP2O43150 1006 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 TADA2AO75478 443 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 GTF2F1P35269 517 aaKnown RBP eCLIP13.21□□□□□ -0.3
IRF1-208ENST00000472045 ZBED6P86452 979 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 CYP27A1Q02318 531 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 CDO1Q16878 200 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 RWDD4Q6NW29 188 aaKnown RBP13.21□□□□□ -0.3
IRF1-208ENST00000472045 KAZALD1Q96I82 304 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 RIT2Q99578 217 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 EFCC1Q9HA90 598 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 DONSONQ9NYP3 566 aa13.21□□□□□ -0.3
IRF1-208ENST00000472045 C17orf102A2RUQ5 167 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 A8MXQ7 604 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 SGK1O00141 431 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 SERPING1P05155 500 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 NFKBIAP25963 317 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 CASP1P29466 404 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 RECQLP46063 649 aaPredicted RBP13.2□□□□□ -0.3
IRF1-208ENST00000472045 DUOXA2Q1HG44 320 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 DACT2Q5SW24 774 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 HHATQ5VTY9 493 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 GLB1LQ6UWU2 654 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 TOGARAM2Q6ZUX3 1019 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 EFCAB13Q8IY85 973 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 SH2D3AQ9BRG2 576 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 PPP1R9AQ9ULJ8 1098 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 TMX2Q9Y320 296 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 SCINQ9Y6U3 715 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 HEXIM1O94992 359 aaKnown RBP13.2□□□□□ -0.3
IRF1-208ENST00000472045 SLC4A1P02730 911 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 HPDP32754 393 aaPredicted RBP13.2□□□□□ -0.3
IRF1-208ENST00000472045 BBOF1Q8ND07 529 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 SALL1Q9NSC2 1324 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 PGK2P07205 417 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 TEX2Q8IWB9 1127 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 DYNLT1P63172 113 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 NAALADL2Q58DX5 795 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 NAA35Q5VZE5 725 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 DENND2CQ68D51 928 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 YAF2Q8IY57 180 aa13.2□□□□□ -0.3
IRF1-208ENST00000472045 LRRD1A4D1F6 860 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 ANTXR2P58335 489 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 CCDC6Q16204 474 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 WHAMMP3Q1A5X7 153 aa13.19□□□□□ -0.3
IRF1-208ENST00000472045 FYB2Q5VWT5 728 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms