RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ALX1Q15699 326 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 OLFML2BQ68BL8 750 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 CYFIP2Q96F07 1278 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 RNPC3Q96LT9 517 aaKnown RBP10.75□□□□□ -0.69
NUP50-214ENST00000469163 ZDHHC15Q96MV8 337 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 PANK4Q9NVE7 773 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 FANCLQ9NW38 375 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 WNT7AO00755 349 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 CYTH3O43739 400 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 TNFAIP1Q13829 316 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 RRP1BQ14684 758 aaKnown RBP10.75□□□□□ -0.69
NUP50-214ENST00000469163 AGBL1Q96MI9 1066 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 LLPHQ9BRT6 129 aaKnown RBP10.75□□□□□ -0.69
NUP50-214ENST00000469163 CSRNP2Q9H175 543 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 RRAGCQ9HB90 399 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 CCPG1Q9ULG6 757 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 GINS2Q9Y248 185 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 A0A1W2PRG0 241 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 MMP1P03956 469 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 PFKFB1P16118 471 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 HPDP32754 393 aaPredicted RBP10.75□□□□□ -0.69
NUP50-214ENST00000469163 ADCY7P51828 1080 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 FANCCQ00597 558 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 APBA1Q02410 837 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 QRICH1Q2TAL8 776 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 C16orf86Q6ZW13 317 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 CACNA2D3Q8IZS8 1091 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.75□□□□□ -0.69
NUP50-214ENST00000469163 HDAC7Q8WUI4 952 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 ZNF668Q96K58 619 aaPredicted RBP10.75□□□□□ -0.69
NUP50-214ENST00000469163 GOLPH3LQ9H4A5 285 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 DMAP1Q9NPF5 467 aaPredicted RBP10.75□□□□□ -0.69
NUP50-214ENST00000469163 TRPV5Q9NQA5 729 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 SEL1LQ9UBV2 794 aa10.75□□□□□ -0.69
NUP50-214ENST00000469163 STK10O94804 968 aaKnown RBP10.74□□□□□ -0.69
NUP50-214ENST00000469163 TDP2O95551 362 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 FAM107AO95990 144 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 NNTQ13423 1086 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 SH2D4BQ5SQS7 431 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 WDR93Q6P2C0 686 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 HHIPL2Q6UWX4 724 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 NEDD1Q8NHV4 660 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 SERTAD1Q9UHV2 236 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 SBF2Q86WG5 1849 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 SPEF2Q9C093 1822 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 POTEMA6NI47 508 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 USO1O60763 962 aaKnown RBP10.74□□□□□ -0.69
NUP50-214ENST00000469163 HSF2BPO75031 334 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
NUP50-214ENST00000469163 GSTT1P30711 240 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 SEC23AQ15436 765 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 CCDC125Q86Z20 511 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 SIX5Q8N196 739 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 WDR60Q8WVS4 1066 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 ATP6V0A1Q93050 837 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 DNAJC18Q9H819 358 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 LUC7LQ9NQ29 371 aaKnown RBP10.74□□□□□ -0.69
NUP50-214ENST00000469163 SERPINA10Q9UK55 444 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 KCNH3Q9ULD8 1083 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 SLC26A4O43511 780 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 ADKP55263 362 aaKnown RBP10.74□□□□□ -0.69
NUP50-214ENST00000469163 FBXO11Q86XK2 927 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 PPP1R14BQ96C90 147 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 SIKE1Q9BRV8 207 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 CARD9Q9H257 536 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 DHX36Q9H2U1 1008 aaKnown RBP10.74□□□□□ -0.69
NUP50-214ENST00000469163 TUBA8Q9NY65 449 aaPredicted RBP10.74□□□□□ -0.69
NUP50-214ENST00000469163 SUCLA2Q9P2R7 463 aaPredicted RBP10.74□□□□□ -0.69
NUP50-214ENST00000469163 STK38LQ9Y2H1 464 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 GMEB1Q9Y692 573 aa10.74□□□□□ -0.69
NUP50-214ENST00000469163 TJP1Q07157 1748 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 LAMB4A4D0S4 1761 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 STAT3P40763 770 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 SERPINB4P48594 390 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 PLOD1Q02809 727 aaPredicted RBP10.73□□□□□ -0.69
NUP50-214ENST00000469163 DTHD1Q6ZMT9 781 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 ZNF713Q8N859 430 aaPredicted RBP10.73□□□□□ -0.69
NUP50-214ENST00000469163 KRI1Q8N9T8 703 aaKnown RBP10.73□□□□□ -0.69
NUP50-214ENST00000469163 PRCCQ92733 491 aaPredicted RBP10.73□□□□□ -0.69
NUP50-214ENST00000469163 HIC2Q96JB3 615 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 MRPL44Q9H9J2 332 aaKnown RBP10.73□□□□□ -0.69
NUP50-214ENST00000469163 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.73□□□□□ -0.69
NUP50-214ENST00000469163 EFR3BQ9Y2G0 817 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 ASB3Q9Y575 518 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 ATP1A3P13637 1013 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 STAT2P52630 851 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 PPP4CP60510 307 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 ANO7Q6IWH7 933 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 DGKHQ86XP1 1220 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 NACC2Q96BF6 587 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 L3MBTL3Q96JM7 780 aaPredicted RBP10.73□□□□□ -0.69
NUP50-214ENST00000469163 GBP5Q96PP8 586 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 PPP1R16BQ96T49 567 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 PFDN4Q9NQP4 134 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 TCP11L1Q9NUJ3 509 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 DAAM1Q9Y4D1 1078 aa10.73□□□□□ -0.69
NUP50-214ENST00000469163 BAZ2AQ9UIF9 1905 aaKnown RBP10.73□□□□□ -0.69
NUP50-214ENST00000469163 SKOR1P84550 965 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms