RNA–Protein interactions for RNA: ENST00000468397.1

CDK11A-212, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-212ENST00000468397 ZNF410Q86VK4 478 aa18.42■□□□□ 0.54
CDK11A-212ENST00000468397 KRI1Q8N9T8 703 aaKnown RBP18.42■□□□□ 0.54
CDK11A-212ENST00000468397 MCPH1Q8NEM0 835 aa18.42■□□□□ 0.54
CDK11A-212ENST00000468397 TMEM143Q96AN5 459 aa18.42■□□□□ 0.54
CDK11A-212ENST00000468397 SLC9A7Q96T83 725 aa18.42■□□□□ 0.54
CDK11A-212ENST00000468397 OSBPL7Q9BZF2 842 aa18.42■□□□□ 0.54
CDK11A-212ENST00000468397 BHMT2Q9H2M3 363 aa18.42■□□□□ 0.54
CDK11A-212ENST00000468397 TFIP11Q9UBB9 837 aaKnown RBP18.42■□□□□ 0.54
CDK11A-212ENST00000468397 CFAP45Q9UL16 551 aa18.42■□□□□ 0.54
CDK11A-212ENST00000468397 ATP6V1DQ9Y5K8 247 aa18.42■□□□□ 0.54
CDK11A-212ENST00000468397 COL4A3BPQ9Y5P4 624 aa18.42■□□□□ 0.54
CDK11A-212ENST00000468397 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.41■□□□□ 0.54
CDK11A-212ENST00000468397 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.41■□□□□ 0.54
CDK11A-212ENST00000468397 SPTLC2O15270 562 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 EYA4O95677 639 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 TXLNAP40222 546 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 WDR5P61964 334 aaKnown RBP18.41■□□□□ 0.54
CDK11A-212ENST00000468397 GRIN1Q05586 938 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 PADI6Q6TGC4 694 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 LINC00301Q8NCQ3 95 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 NLRP4Q96MN2 994 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 FTHL17Q9BXU8 183 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 GCOM2Q9BZD3 368 aaPredicted RBP18.41■□□□□ 0.54
CDK11A-212ENST00000468397 CSRNP2Q9H175 543 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 ADAMTS10Q9H324 1103 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 AGO3Q9H9G7 860 aaKnown RBP18.41■□□□□ 0.54
CDK11A-212ENST00000468397 CDHR5Q9HBB8 845 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 XPNPEP1Q9NQW7 623 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 PADI3Q9ULW8 664 aa18.41■□□□□ 0.54
CDK11A-212ENST00000468397 GPR182O15218 404 aa18.4■□□□□ 0.54
CDK11A-212ENST00000468397 ASAP2O43150 1006 aa18.4■□□□□ 0.54
CDK11A-212ENST00000468397 PPP6R2O75170 966 aa18.4■□□□□ 0.54
CDK11A-212ENST00000468397 ATP2A2P16615 1042 aaKnown RBP18.4■□□□□ 0.54
CDK11A-212ENST00000468397 EIF4BP23588 611 aaKnown RBP18.4■□□□□ 0.54
CDK11A-212ENST00000468397 SMAD3P84022 425 aaKnown RBP18.4■□□□□ 0.54
CDK11A-212ENST00000468397 MXD4Q14582 209 aaPredicted RBP18.4■□□□□ 0.54
CDK11A-212ENST00000468397 TCTN1Q2MV58 587 aa18.4■□□□□ 0.54
CDK11A-212ENST00000468397 PHOSPHO2Q8TCD6 241 aa18.4■□□□□ 0.54
CDK11A-212ENST00000468397 KCNG4Q8TDN1 519 aa18.4■□□□□ 0.54
CDK11A-212ENST00000468397 TMEM40Q8WWA1 233 aa18.4■□□□□ 0.54
CDK11A-212ENST00000468397 PRPF31Q8WWY3 499 aaKnown RBP18.4■□□□□ 0.54
CDK11A-212ENST00000468397 ZNF668Q96K58 619 aaPredicted RBP18.4■□□□□ 0.54
CDK11A-212ENST00000468397 ZDHHC9Q9Y397 364 aa18.4■□□□□ 0.54
CDK11A-212ENST00000468397 NOC2LQ9Y3T9 749 aaKnown RBP18.4■□□□□ 0.54
CDK11A-212ENST00000468397 LAMA3Q16787 3333 aa18.4■□□□□ 0.54
CDK11A-212ENST00000468397 E9PMD0 336 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 AMHP03971 560 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 DARSP14868 501 aaKnown RBP18.39■□□□□ 0.53
CDK11A-212ENST00000468397 CYP11B2P19099 503 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 NUCB2P80303 420 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 DNM1Q05193 864 aaKnown RBP18.39■□□□□ 0.53
CDK11A-212ENST00000468397 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 NFX1Q12986 1120 aaKnown RBP18.39■□□□□ 0.53
CDK11A-212ENST00000468397 GRB10Q13322 594 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 TFDP1Q14186 410 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 TMEM119Q4V9L6 283 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 PNMA5Q96PV4 448 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 INO80BQ9C086 356 aaPredicted RBP18.39■□□□□ 0.53
CDK11A-212ENST00000468397 CCSER1Q9C0I3 900 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 ERVK-5Q9HDB9 667 aa18.39■□□□□ 0.53
CDK11A-212ENST00000468397 A0A087WZ62 844 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 KRT85P78386 507 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 KARSQ15046 597 aaKnown RBP18.38■□□□□ 0.53
CDK11A-212ENST00000468397 FAM102BQ5T8I3 360 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 KCNK18Q7Z418 384 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 FAM228AQ86W67 206 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 KSR1Q8IVT5 923 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 SYMPKQ92797 1274 aaKnown RBP18.38■□□□□ 0.53
CDK11A-212ENST00000468397 CLIC6Q96NY7 704 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 PLIN2Q99541 437 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 FDXACB1Q9BRP7 624 aaPredicted RBP18.38■□□□□ 0.53
CDK11A-212ENST00000468397 POLR3FQ9H1D9 316 aaPredicted RBP18.38■□□□□ 0.53
CDK11A-212ENST00000468397 CCDC39Q9UFE4 941 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 ST3GAL5Q9UNP4 418 aa18.38■□□□□ 0.53
CDK11A-212ENST00000468397 PTPRSQ13332 1948 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 SOX1O00570 391 aaPredicted RBP18.37■□□□□ 0.53
CDK11A-212ENST00000468397 SLC34A2O95436 690 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 SSBP05455 408 aaKnown RBP eCLIP18.37■□□□□ 0.53
CDK11A-212ENST00000468397 SRGAP2CP0DJJ0 459 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 NCLP19338 710 aaKnown RBP18.37■□□□□ 0.53
CDK11A-212ENST00000468397 SFPQP23246 707 aaKnown RBP eCLIP18.37■□□□□ 0.53
CDK11A-212ENST00000468397 ARL2P36404 184 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 PHKA2P46019 1235 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 DEFB103AP81534 67 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 RAB30Q15771 203 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 SPECC1Q5M775 1068 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 FAM109BQ6ICB4 259 aaPredicted RBP18.37■□□□□ 0.53
CDK11A-212ENST00000468397 MAEAQ7L5Y9 396 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 MYOCDQ8IZQ8 938 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 RNF149Q8NC42 400 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 EPSTI1Q96J88 318 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 GBF1Q92538 1859 aa18.37■□□□□ 0.53
CDK11A-212ENST00000468397 LAMA2P24043 3122 aaKnown RBP18.36■□□□□ 0.53
CDK11A-212ENST00000468397 CUTAO60888 179 aa18.36■□□□□ 0.53
CDK11A-212ENST00000468397 PLA2G4BP0C869 781 aa18.36■□□□□ 0.53
CDK11A-212ENST00000468397 PLCG1P19174 1290 aa18.36■□□□□ 0.53
CDK11A-212ENST00000468397 FXR1P51114 621 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDK11A-212ENST00000468397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDK11A-212ENST00000468397 SRGAP1Q7Z6B7 1085 aa18.36■□□□□ 0.53
CDK11A-212ENST00000468397 HERC6Q8IVU3 1022 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms