RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SOX5P35711 763 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 STAT3P40763 770 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 NEK4P51957 841 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 TOP3AQ13472 1001 aaPredicted RBP6.08□□□□□ -1.44
LRCH3-211ENST00000466054 PIK3R6Q5UE93 754 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 PCSK4Q6UW60 755 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 FILIP1Q7Z7B0 1213 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 CAAP1Q9H8G2 361 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 CABP5Q9NP86 173 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 CEP72Q9P209 647 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 DSEQ9UL01 958 aa6.08□□□□□ -1.44
LRCH3-211ENST00000466054 M0R2C6 588 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 CBX4O00257 560 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 NKRFO15226 690 aaKnown RBP eCLIP6.07□□□□□ -1.44
LRCH3-211ENST00000466054 GLRX3O76003 335 aaKnown RBP6.07□□□□□ -1.44
LRCH3-211ENST00000466054 LTFP02788 710 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 HMGCRP04035 888 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 COL6A2P12110 1019 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 PDE6AP16499 860 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 NCLP19338 710 aaKnown RBP6.07□□□□□ -1.44
LRCH3-211ENST00000466054 ETV4P43268 484 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 MECP2P51608 486 aaKnown RBP6.07□□□□□ -1.44
LRCH3-211ENST00000466054 GRM7Q14831 915 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 FIGNQ5HY92 759 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 ARHGAP36Q6ZRI8 547 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 OTOP1Q7RTM1 612 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-211ENST00000466054 ADGRE4PQ86SQ3 457 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 RNF180Q86T96 592 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 TMPRSS6Q8IU80 811 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 CHST14Q8NCH0 376 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 CHAC2Q8WUX2 184 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 MTFR1LQ9H019 292 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 NELFAQ9H3P2 528 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 PTGFRNQ9P2B2 879 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 SRPK3Q9UPE1 567 aa6.07□□□□□ -1.44
LRCH3-211ENST00000466054 KPNA6O60684 536 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 PEX11BO96011 259 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 AMY2AP04746 511 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 AMY2BP19961 511 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 KCNQ1P51787 676 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 EPHA5P54756 1037 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 DUSP8Q13202 625 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 EP400NLQ6ZTU2 488 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 OSTM1Q86WC4 334 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 CISD2Q8N5K1 135 aaKnown RBP6.06□□□□□ -1.44
LRCH3-211ENST00000466054 C2orf69Q8N8R5 385 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 TMEM176AQ96HP8 235 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 SMURF1Q9HCE7 757 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 SLC39A2Q9NP94 309 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 IFT57Q9NWB7 429 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 B4GALT6Q9UBX8 382 aa6.06□□□□□ -1.44
LRCH3-211ENST00000466054 TCRBV5S4A2TA0A5A2 114 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 SLC12A8A0AV02 714 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 MATN2O00339 956 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 CLASP2O75122 1294 aaKnown RBP6.05□□□□□ -1.44
LRCH3-211ENST00000466054 GJA4P35212 333 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 JAM2P57087 298 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 NFYCQ13952 458 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 PCBP1Q15365 356 aaKnown RBP eCLIP6.05□□□□□ -1.44
LRCH3-211ENST00000466054 KCTD1Q719H9 257 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 ZCRB1Q8TBF4 217 aaKnown RBP6.05□□□□□ -1.44
LRCH3-211ENST00000466054 SH3RF2Q8TEC5 729 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 BOCQ9BWV1 1114 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 BRINP2Q9C0B6 783 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 KIAA1683Q9H0B3 1180 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 ARHGAP28Q9P2N2 729 aa6.05□□□□□ -1.44
LRCH3-211ENST00000466054 TRAF5O00463 557 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 MAN2B1O00754 1011 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 RHOBTB3O94955 611 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 F2P00734 622 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 KRT15P19012 456 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 KRT4P19013 534 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 FBLP22087 321 aaKnown RBP6.04□□□□□ -1.44
LRCH3-211ENST00000466054 MEOX1P50221 254 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 DHCR24Q15392 516 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 USP30Q70CQ3 517 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 DDX46Q7L014 1031 aaKnown RBP6.04□□□□□ -1.44
LRCH3-211ENST00000466054 PTRH1Q86Y79 214 aaKnown RBP6.04□□□□□ -1.44
LRCH3-211ENST00000466054 OR2W6PQ8NHA6 318 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 RIOX1Q9H6W3 641 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 ZKSCAN5Q9Y2L8 839 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 ATP23Q9Y6H3 246 aa6.04□□□□□ -1.44
LRCH3-211ENST00000466054 MASP2O00187 686 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 GAS7O60861 476 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 RPS6KA4O75676 772 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 CPEP16870 476 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 SCNN1BP51168 640 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 CT47A1Q5JQC4 288 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-211ENST00000466054 ZKSCAN2Q63HK3 967 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 NOSTRINQ8IVI9 506 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 WDR48Q8TAF3 677 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 LEO1Q8WVC0 666 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-211ENST00000466054 NRDE2Q9H7Z3 1164 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.03□□□□□ -1.44
LRCH3-211ENST00000466054 ADARB2Q9NS39 739 aaKnown RBP6.03□□□□□ -1.44
LRCH3-211ENST00000466054 ZNHIT2Q9UHR6 403 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 FBXO10Q9UK96 956 aa6.03□□□□□ -1.44
LRCH3-211ENST00000466054 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
LRCH3-211ENST00000466054 PTPDC1A2A3K4 754 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms