RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 H7C1D1 291 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 BUB1BO60566 1050 aaPredicted RBP9.46□□□□□ -0.89
SHQ1-203ENST00000463369 SNUPNO95149 360 aaKnown RBP9.46□□□□□ -0.89
SHQ1-203ENST00000463369 GLI1P08151 1106 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 PAFAH1B1P43034 410 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 PAK2Q13177 524 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 RIPK1Q13546 671 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 SLMAPQ14BN4 828 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 RBBP5Q15291 538 aaKnown RBP9.46□□□□□ -0.89
SHQ1-203ENST00000463369 CDC37Q16543 378 aaPredicted RBP9.46□□□□□ -0.89
SHQ1-203ENST00000463369 Q3C1V9 767 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 ERAP2Q6P179 960 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 ARMC9Q7Z3E5 817 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 MICU3Q86XE3 530 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 IRF2BP1Q8IU81 584 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 MAPKAPK5Q8IW41 473 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 MICALL2Q8IY33 904 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 CACNA2D3Q8IZS8 1091 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 TCP11Q8WWU5 503 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 NELFBQ8WX92 580 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 HVCN1Q96D96 273 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 TBC1D31Q96DN5 1066 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 STAMBPL1Q96FJ0 436 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 THOC1Q96FV9 657 aaKnown RBP9.46□□□□□ -0.89
SHQ1-203ENST00000463369 SPAG5Q96R06 1193 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 NUP58Q9BVL2 599 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 SEZ6LQ9BYH1 1024 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 SENP2Q9HC62 589 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 SRA1Q9HD15 236 aaKnown RBP9.46□□□□□ -0.89
SHQ1-203ENST00000463369 SLC39A2Q9NP94 309 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 DDX4Q9NQI0 724 aaKnown RBP9.46□□□□□ -0.89
SHQ1-203ENST00000463369 ZNHIT6Q9NWK9 470 aaKnown RBP9.46□□□□□ -0.89
SHQ1-203ENST00000463369 CLIC5Q9NZA1 410 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 KCNJ14Q9UNX9 436 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 C15orf41Q9Y2V0 281 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 HYOU1Q9Y4L1 999 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 ATAD5Q96QE3 1844 aa9.46□□□□□ -0.89
SHQ1-203ENST00000463369 WDR90Q96KV7 1748 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 GOLGA8AA7E2F4 631 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 LGALS16A8MUM7 142 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 WNT10BO00744 389 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 ANP32DO95626 131 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 PARP1P09874 1014 aaKnown RBP9.46□□□□□ -0.9
SHQ1-203ENST00000463369 PECAM1P16284 738 aaPredicted RBP9.46□□□□□ -0.9
SHQ1-203ENST00000463369 CYP27A1Q02318 531 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 AKNAD1Q5T1N1 836 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 C12orf60Q5U649 245 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 CAPRIN2Q6IMN6 1127 aaKnown RBP9.46□□□□□ -0.9
SHQ1-203ENST00000463369 MIS18BP1Q6P0N0 1132 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 SNRNP27Q8WVK2 155 aaKnown RBP9.46□□□□□ -0.9
SHQ1-203ENST00000463369 RETREG1Q9H6L5 497 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 RBM12Q9NTZ6 932 aaKnown RBP9.46□□□□□ -0.9
SHQ1-203ENST00000463369 GPRC5DQ9NZD1 345 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 BAIAP2L1Q9UHR4 511 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 SLC12A6Q9UHW9 1150 aa9.46□□□□□ -0.9
SHQ1-203ENST00000463369 MYH10P35580 1976 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 CYP2D7A0A087X1C5 515 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 CCDC85CA6NKD9 419 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 USO1O60763 962 aaKnown RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 SMNDC1O75940 238 aaKnown RBP eCLIP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 DDNO94850 711 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 PCP11498 1178 aaKnown RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 HPDP32754 393 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 CTHP32929 405 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 GUCY1A2P33402 732 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 PEX19P40855 299 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 CDK17Q00537 523 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 NFIAQ12857 509 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 TRAF1Q13077 416 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 PICALMQ13492 652 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 CCDC92Q53HC0 331 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 FKBP1CQ5VVH2 108 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 DPY19L2Q6NUT2 758 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 HIBCHQ6NVY1 386 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 NFRKBQ6P4R8 1299 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 PDXDC1Q6P996 788 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 LRIG3Q6UXM1 1119 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 TBC1D10CQ8IV04 446 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 CCHCR1Q8TD31 782 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 IGDCC4Q8TDY8 1250 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 PXYLP1Q8TE99 480 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 SMCR8Q8TEV9 937 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 PARD3BQ8TEW8 1205 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 WHAMMQ8TF30 809 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 IFT81Q8WYA0 676 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 SYMPKQ92797 1274 aaKnown RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 ITFG2Q969R8 447 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 TMEM87BQ96K49 555 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 EPB41L5Q9HCM4 733 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 AGPAT5Q9NUQ2 364 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 SMARCAL1Q9NZC9 954 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 CXXC1Q9P0U4 656 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 VPS54Q9P1Q0 977 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF70Q9UC06 446 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 LRWD1Q9UFC0 647 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 FAM198AQ9UFP1 575 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 POLG2Q9UHN1 485 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms