RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 ZDHHC18Q9NUE0 388 aa9.93□□□□□ -0.82
LINC01140-201ENST00000461990 LRP6O75581 1613 aa9.93□□□□□ -0.82
LINC01140-201ENST00000461990 PHRF1Q9P1Y6 1649 aaKnown RBP9.93□□□□□ -0.82
LINC01140-201ENST00000461990 FOXP2O15409 715 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 SERPINB7O75635 380 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 ETS2P15036 469 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 KLK7P49862 253 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 PMS2P54278 862 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 CCDC6Q16204 474 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 DENND2CQ68D51 928 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 TTI2Q6NXR4 508 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 DAAM2Q86T65 1068 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 C2CD5Q86YS7 1000 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 PASD1Q8IV76 773 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 DIS3L2Q8IYB7 885 aaKnown RBP9.92□□□□□ -0.82
LINC01140-201ENST00000461990 RIBC1Q8N443 379 aaPredicted RBP9.92□□□□□ -0.82
LINC01140-201ENST00000461990 ARHGEF38Q9NXL2 777 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 CHPF2Q9P2E5 772 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 hCG_2014768A0A024R1R8 64 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 TBC1D12O60347 775 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 RPN1P04843 607 aaKnown RBP9.92□□□□□ -0.82
LINC01140-201ENST00000461990 PTPN4P29074 926 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 IFNAR2P48551 515 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 HNRNPDQ14103 355 aaKnown RBP9.92□□□□□ -0.82
LINC01140-201ENST00000461990 ZCWPW2Q504Y3 356 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 ZNF362Q5T0B9 420 aaPredicted RBP9.92□□□□□ -0.82
LINC01140-201ENST00000461990 TCERG1LQ5VWI1 586 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 PHLDB3Q6NSJ2 640 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 CCDC174Q6PII3 467 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 APOA5Q6Q788 366 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 B3GNT6Q6ZMB0 384 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 Q6ZNX1 250 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 INTS8Q75QN2 995 aaKnown RBP9.92□□□□□ -0.82
LINC01140-201ENST00000461990 RSPH3Q86UC2 560 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 NUP93Q8N1F7 819 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 FAM217BQ9NTX9 383 aaPredicted RBP9.92□□□□□ -0.82
LINC01140-201ENST00000461990 USP40Q9NVE5 1235 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 CHD4Q14839 1912 aa9.92□□□□□ -0.82
LINC01140-201ENST00000461990 A6NJR5 290 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 E9PBE3 544 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 PGRMC1O00264 195 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 BUB1O43683 1085 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 ITGA6P23229 1130 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 EPHB2P29323 1055 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 STIP1P31948 543 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 HALP42357 657 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 DRG2P55039 364 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 SF3A3Q12874 501 aaKnown RBP eCLIP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 RCN1Q15293 331 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 NANOGNBQ7Z5D8 188 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 KBTBD2Q8IY47 623 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 EXOC8Q8IYI6 725 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 BBS5Q8N3I7 341 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 CTNNBL1Q8WYA6 563 aaPredicted RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 PHKBQ93100 1093 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 ABTB1Q969K4 478 aaPredicted RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 ROPN1BQ9BZX4 212 aaPredicted RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 KIAA1683Q9H0B3 1180 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 ROPN1Q9HAT0 212 aaPredicted RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 ZNF180Q9UJW8 692 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 SIK3Q9Y2K2 1263 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 UTP11Q9Y3A2 253 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 ATAD5Q96QE3 1844 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 RNF113AO15541 343 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 AP1G1O43747 822 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 PSMG1O95456 288 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 UBTFL6P0CB48 400 aaPredicted RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 CRABP2P29373 138 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 GTF2H1P32780 548 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 SLC1A4P43007 532 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 CCDC153Q494R4 210 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 KSR2Q6VAB6 950 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 ACAD11Q709F0 780 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 MAGEB18Q96M61 343 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 SYNCQ9H7C4 482 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 SAP30BPQ9UHR5 308 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 FAM32AQ9Y421 112 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 USH1CQ9Y6N9 552 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 TOPAZ1Q8N9V7 1692 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 EIF3FO00303 357 aaPredicted RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 TBX10O75333 385 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 DCTN3O75935 186 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 CLCN2P51788 898 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 PMS1P54277 932 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 RPL26P61254 145 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 ITGA7Q13683 1181 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 AUHQ13825 339 aaKnown RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 INAQ16352 499 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 C16orf87Q6PH81 154 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 HS2ST1Q7LGA3 356 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 SGMS1Q86VZ5 419 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 CROCCP3Q8IVE0 287 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 CYP4X1Q8N118 509 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 IL17REQ8NFR9 667 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 HELBQ8NG08 1087 aaPredicted RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 TAF4BQ92750 862 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 SYN2Q92777 582 aaPredicted RBP9.91□□□□□ -0.82
LINC01140-201ENST00000461990 SAR1AQ9NR31 198 aa9.91□□□□□ -0.82
LINC01140-201ENST00000461990 PAG1Q9NWQ8 432 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms