RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 PADI3Q9ULW8 664 aa20.48■□□□□ 0.87
DDR1-241ENST00000460944 DNM3Q9UQ16 869 aa20.48■□□□□ 0.87
DDR1-241ENST00000460944 COL4A3BPQ9Y5P4 624 aa20.48■□□□□ 0.87
DDR1-241ENST00000460944 GBF1Q92538 1859 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 GPR182O15218 404 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 SLC26A4O43511 780 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 NFX1Q12986 1120 aaKnown RBP20.47■□□□□ 0.87
DDR1-241ENST00000460944 ECM1Q16610 540 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 CABP7Q86V35 215 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 MCPH1Q8NEM0 835 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 RASSF8Q8NHQ8 419 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 TMEM40Q8WWA1 233 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 CALML4Q96GE6 196 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 LRCH3Q96II8 777 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 ZNF668Q96K58 619 aaPredicted RBP20.47■□□□□ 0.87
DDR1-241ENST00000460944 NLRP4Q96MN2 994 aa20.47■□□□□ 0.87
DDR1-241ENST00000460944 MMTAG2Q9BU76 263 aaKnown RBP20.47■□□□□ 0.87
DDR1-241ENST00000460944 NOC2LQ9Y3T9 749 aaKnown RBP20.47■□□□□ 0.87
DDR1-241ENST00000460944 A0A087WZ62 844 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 ASAP2O43150 1006 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 EIF4BP23588 611 aaKnown RBP20.46■□□□□ 0.87
DDR1-241ENST00000460944 NASPP49321 788 aaPredicted RBP20.46■□□□□ 0.87
DDR1-241ENST00000460944 SLC39A14Q15043 492 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 RAB30Q15771 203 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 FOXD4L6Q3SYB3 417 aaPredicted RBP20.46■□□□□ 0.87
DDR1-241ENST00000460944 FAM109BQ6ICB4 259 aaPredicted RBP20.46■□□□□ 0.87
DDR1-241ENST00000460944 PADI6Q6TGC4 694 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 FOXD4L3Q6VB84 417 aaPredicted RBP20.46■□□□□ 0.87
DDR1-241ENST00000460944 MYOCDQ8IZQ8 938 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 KCTD17Q8N5Z5 321 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 FDXACB1Q9BRP7 624 aaPredicted RBP20.46■□□□□ 0.87
DDR1-241ENST00000460944 INO80BQ9C086 356 aaPredicted RBP20.46■□□□□ 0.87
DDR1-241ENST00000460944 BHMT2Q9H2M3 363 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 ERVK-5Q9HDB9 667 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 XPNPEP1Q9NQW7 623 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 MSRAQ9UJ68 235 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 SRPRBQ9Y5M8 271 aaKnown RBP20.46■□□□□ 0.87
DDR1-241ENST00000460944 MORC2Q9Y6X9 1032 aaPredicted RBP20.46■□□□□ 0.87
DDR1-241ENST00000460944 PTPRSQ13332 1948 aa20.46■□□□□ 0.87
DDR1-241ENST00000460944 GRXCR1A8MXD5 290 aa20.45■□□□□ 0.86
DDR1-241ENST00000460944 EYA4O95677 639 aa20.45■□□□□ 0.86
DDR1-241ENST00000460944 DARSP14868 501 aaKnown RBP20.45■□□□□ 0.86
DDR1-241ENST00000460944 DEFB103AP81534 67 aa20.45■□□□□ 0.86
DDR1-241ENST00000460944 MXD4Q14582 209 aaPredicted RBP20.45■□□□□ 0.86
DDR1-241ENST00000460944 HYIQ5T013 277 aa20.45■□□□□ 0.86
DDR1-241ENST00000460944 ATL3Q6DD88 541 aa20.45■□□□□ 0.86
DDR1-241ENST00000460944 FAM228AQ86W67 206 aa20.45■□□□□ 0.86
DDR1-241ENST00000460944 HERC6Q8IVU3 1022 aa20.45■□□□□ 0.86
DDR1-241ENST00000460944 PRPF31Q8WWY3 499 aaKnown RBP20.45■□□□□ 0.86
DDR1-241ENST00000460944 ZBED2Q9BTP6 218 aa20.45■□□□□ 0.86
DDR1-241ENST00000460944 DAXXQ9UER7 740 aaPredicted RBP20.45■□□□□ 0.86
DDR1-241ENST00000460944 FBXO2Q9UK22 296 aaPredicted RBP20.45■□□□□ 0.86
DDR1-241ENST00000460944 ST3GAL5Q9UNP4 418 aa20.45■□□□□ 0.86
DDR1-241ENST00000460944 MYO9BQ13459 2157 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 LAMA2P24043 3122 aaKnown RBP20.44■□□□□ 0.86
DDR1-241ENST00000460944 E9PMD0 336 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 YEATS4O95619 227 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 BRD1O95696 1058 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 SFPQP23246 707 aaKnown RBP eCLIP20.44■□□□□ 0.86
DDR1-241ENST00000460944 DNAJB2P25686 324 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 TXLNAP40222 546 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 GRIN1Q05586 938 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 LAMTOR4Q0VGL1 99 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 TFDP1Q14186 410 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 GPR153Q6NV75 609 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.44■□□□□ 0.86
DDR1-241ENST00000460944 KRI1Q8N9T8 703 aaKnown RBP20.44■□□□□ 0.86
DDR1-241ENST00000460944 LINC00301Q8NCQ3 95 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 PBX4Q9BYU1 374 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 CSRNP2Q9H175 543 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 POLR3FQ9H1D9 316 aaPredicted RBP20.44■□□□□ 0.86
DDR1-241ENST00000460944 TFIP11Q9UBB9 837 aaKnown RBP20.44■□□□□ 0.86
DDR1-241ENST00000460944 CFAP45Q9UL16 551 aa20.44■□□□□ 0.86
DDR1-241ENST00000460944 TTC3P53804 2025 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 RBAK-RBAKDNI3L0D1 243 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 SPTLC2O15270 562 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 SRGAP2CP0DJJ0 459 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 CYP11B2P19099 503 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 GRB10Q13322 594 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 FAM102BQ5T8I3 360 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 MAEAQ7L5Y9 396 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 KSR1Q8IVT5 923 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 PNMA5Q96PV4 448 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 PLIN2Q99541 437 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 PCDHA11Q9Y5I1 949 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 ATP6V1DQ9Y5K8 247 aa20.43■□□□□ 0.86
DDR1-241ENST00000460944 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.42■□□□□ 0.86
DDR1-241ENST00000460944 DENND3A2RUS2 1198 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 TLL1O43897 1013 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 SSBP05455 408 aaKnown RBP eCLIP20.42■□□□□ 0.86
DDR1-241ENST00000460944 ARL2P36404 184 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 PHKA2P46019 1235 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 RABGGTBP53611 331 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 TMEM119Q4V9L6 283 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 ZNF697Q5TEC3 545 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 SRGAP1Q7Z6B7 1085 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 RNF149Q8NC42 400 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 TIFAQ96CG3 184 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 CCSER1Q9C0I3 900 aa20.42■□□□□ 0.86
DDR1-241ENST00000460944 CCDC39Q9UFE4 941 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms