RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 TEX9Q8N6V9 391 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 ZNF608Q9ULD9 1512 aaPredicted RBP9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 APOA4P06727 396 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 IFT88Q13099 833 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 ZSCAN32Q9NX65 697 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 PTCH1Q13635 1447 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 GOLGA8SH3BPF8 625 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 PIK3R2O00459 728 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 GGPS1O95749 300 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 OR6B2Q6IFH4 312 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 TNIP2Q8NFZ5 429 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 UGGT1Q9NYU2 1555 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 ZC3H13Q5T200 1668 aaKnown RBP9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 DENND3A2RUS2 1198 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 GOLGA8RI6L899 631 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 APOA1P02647 267 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 DCAF4Q8WV16 495 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 SH3KBP1Q96B97 665 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 TADA1Q96BN2 335 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 FOPNLQ96NB1 174 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 COPEO14579 308 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 AP3B2Q13367 1082 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 TBC1D9BQ66K14 1250 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 NSUN2Q08J23 767 aaKnown RBP eCLIP9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 AARS2Q5JTZ9 985 aaKnown RBP9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 BRIP1Q9BX63 1249 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 UBE2TQ9NPD8 197 aaPredicted RBP9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 TMEM63CQ9P1W3 806 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 MED14O60244 1454 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 GRID2IPA4D2P6 1211 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 KCNA6P17658 529 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 ZBED6P86452 979 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 TCP11X2Q5H9J9 407 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 SLC10A5Q5PT55 438 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 FAF2Q96CS3 445 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 DDX56Q9NY93 547 aaKnown RBP9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 ATP8A1Q9Y2Q0 1164 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 FIS1Q9Y3D6 152 aa9.47□□□□□ -0.89
SHROOM4-203ENST00000460112 ZNF197O14709 1029 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 PYGMP11217 842 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 SCP2P22307 547 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 TAP1Q03518 808 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 TFDP2Q14188 446 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 CEP70Q8NHQ1 597 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 DESI2Q9BSY9 194 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 PDE11AQ9HCR9 933 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 COBLO75128 1261 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 ARPP19P56211 112 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 RTKN2Q8IZC4 609 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 TAGAPQ8N103 731 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 MCPH1Q8NEM0 835 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 MAP3K20Q9NYL2 800 aaKnown RBP9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 ZFYVE16Q7Z3T8 1539 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 NAALADL2Q58DX5 795 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 CYP4F22Q6NT55 531 aa9.46□□□□□ -0.89
SHROOM4-203ENST00000460112 HUS1O60921 280 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 BBOX1O75936 387 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 BMP3P12645 472 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 PLTPP55058 493 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 AP2B1P63010 937 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 DYNLT1P63172 113 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 GTF2H3Q13889 308 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 LBRQ14739 615 aaKnown RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 ZNF667Q5HYK9 610 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 GJC2Q5T442 439 aaPredicted RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 PPP4R4Q6NUP7 873 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 PLEKHM3Q6ZWE6 761 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 RRM2BQ7LG56 351 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 ADAT2Q7Z6V5 191 aaKnown RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 RASSF3Q86WH2 238 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 ERICH1Q86X53 443 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 YAF2Q8IY57 180 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 BEST2Q8NFU1 509 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 SCFD1Q8WVM8 642 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 KRCC1Q9NPI7 259 aaPredicted RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 SLC4A7Q9Y6M7 1214 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 LRRIQ3A6PVS8 624 aaPredicted RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 HADHAP40939 763 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 RBBP7Q16576 425 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 TRPC5Q9UL62 973 aaPredicted RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 ABT1Q9ULW3 272 aaKnown RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 FNDC3AQ9Y2H6 1198 aaKnown RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 USP32Q8NFA0 1604 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 CPA1P15085 419 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 AP3M2P53677 418 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 ABCE1P61221 599 aaKnown RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 MECOMQ03112 1051 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 EFTUD2Q15029 972 aaKnown RBP eCLIP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 CAPRIN2Q6IMN6 1127 aaKnown RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 SYT2Q8N9I0 419 aaPredicted RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 KLHL8Q9P2G9 620 aaPredicted RBP9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 PCDHGB4Q9UN71 923 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 TSC22D4Q9Y3Q8 395 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 PFASO15067 1338 aa9.46□□□□□ -0.9
SHROOM4-203ENST00000460112 EHD2Q9NZN4 543 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms