RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 PPFIBP1Q86W92 1011 aa17.78■□□□□ 0.44
NELFE-207ENST00000454913 ECHDC2Q86YB7 292 aa17.78■□□□□ 0.44
NELFE-207ENST00000454913 METTL13Q8N6R0 699 aa17.78■□□□□ 0.44
NELFE-207ENST00000454913 HELQQ8TDG4 1101 aa17.78■□□□□ 0.44
NELFE-207ENST00000454913 SLC22A17Q8WUG5 538 aa17.78■□□□□ 0.44
NELFE-207ENST00000454913 RSAD2Q8WXG1 361 aa17.78■□□□□ 0.44
NELFE-207ENST00000454913 MRPL9Q9BYD2 267 aaKnown RBP17.78■□□□□ 0.44
NELFE-207ENST00000454913 PSTPIP2Q9H939 334 aa17.78■□□□□ 0.44
NELFE-207ENST00000454913 CDV3Q9UKY7 258 aaKnown RBP17.78■□□□□ 0.44
NELFE-207ENST00000454913 SIT1Q9Y3P8 196 aa17.78■□□□□ 0.44
NELFE-207ENST00000454913 ZC3H11AO75152 810 aaKnown RBP eCLIP17.77■□□□□ 0.44
NELFE-207ENST00000454913 ATXN1P54253 815 aaKnown RBP17.77■□□□□ 0.44
NELFE-207ENST00000454913 TROAPQ12815 778 aa17.77■□□□□ 0.44
NELFE-207ENST00000454913 WTAPQ15007 396 aa17.77■□□□□ 0.44
NELFE-207ENST00000454913 CATIPQ7Z7H3 387 aa17.77■□□□□ 0.44
NELFE-207ENST00000454913 SUMF1Q8NBK3 374 aa17.77■□□□□ 0.44
NELFE-207ENST00000454913 CHAMP1Q96JM3 812 aa17.77■□□□□ 0.44
NELFE-207ENST00000454913 SENP2Q9HC62 589 aa17.77■□□□□ 0.44
NELFE-207ENST00000454913 KCNH7Q9NS40 1196 aa17.77■□□□□ 0.44
NELFE-207ENST00000454913 COL1A2P08123 1366 aa17.77■□□□□ 0.43
NELFE-207ENST00000454913 CTSAP10619 480 aa17.76■□□□□ 0.43
NELFE-207ENST00000454913 VARS2Q5ST30 1063 aaKnown RBP17.76■□□□□ 0.43
NELFE-207ENST00000454913 FAM160B1Q5W0V3 765 aa17.76■□□□□ 0.43
NELFE-207ENST00000454913 PCDHA6Q9UN73 950 aa17.76■□□□□ 0.43
NELFE-207ENST00000454913 PCDHA8Q9Y5H6 950 aa17.76■□□□□ 0.43
NELFE-207ENST00000454913 IRAK3Q9Y616 596 aa17.76■□□□□ 0.43
NELFE-207ENST00000454913 MIA3Q5JRA6 1907 aa17.76■□□□□ 0.43
NELFE-207ENST00000454913 NFASCO94856 1347 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 DDX39AO00148 427 aaKnown RBP17.75■□□□□ 0.43
NELFE-207ENST00000454913 GPR32O75388 356 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 SRFP11831 508 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 KLRC2P26717 231 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 POLGP54098 1239 aaPredicted RBP17.75■□□□□ 0.43
NELFE-207ENST00000454913 SART3Q15020 963 aaKnown RBP17.75■□□□□ 0.43
NELFE-207ENST00000454913 ZNF484Q5JVG2 852 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 PDXDC2PQ6P474 469 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 TRMT1LQ7Z2T5 733 aaKnown RBP17.75■□□□□ 0.43
NELFE-207ENST00000454913 TMEM173Q86WV6 379 aaPredicted RBP17.75■□□□□ 0.43
NELFE-207ENST00000454913 CKAP2LQ8IYA6 745 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 GPR161Q8N6U8 529 aaKnown RBP17.75■□□□□ 0.43
NELFE-207ENST00000454913 GPR152Q8TDT2 470 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 SECISBP2LQ93073 1101 aaKnown RBP17.75■□□□□ 0.43
NELFE-207ENST00000454913 MXRA8Q9BRK3 442 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 CACNA1IQ9P0X4 2223 aa17.75■□□□□ 0.43
NELFE-207ENST00000454913 MYH9P35579 1960 aaKnown RBP17.74■□□□□ 0.43
NELFE-207ENST00000454913 KIF5BP33176 963 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 C15orf39Q6ZRI6 1047 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 DDX53Q86TM3 631 aaKnown RBP17.74■□□□□ 0.43
NELFE-207ENST00000454913 SLC44A3Q8N4M1 653 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 CTCFLQ8NI51 663 aaPredicted RBP17.74■□□□□ 0.43
NELFE-207ENST00000454913 STAMQ92783 540 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 SPZ1Q9BXG8 430 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 EMILIN2Q9BXX0 1053 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 ARHGEF3Q9NR81 526 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 DLGAP2Q9P1A6 1054 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 AKT3Q9Y243 479 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 CFAP47Q6ZTR5 3102 aa17.74■□□□□ 0.43
NELFE-207ENST00000454913 DCDC2BA2VCK2 349 aa17.73■□□□□ 0.43
NELFE-207ENST00000454913 POTEMA6NI47 508 aa17.73■□□□□ 0.43
NELFE-207ENST00000454913 N4BP1O75113 896 aaKnown RBP17.73■□□□□ 0.43
NELFE-207ENST00000454913 NLRP11P59045 1033 aaKnown RBP17.73■□□□□ 0.43
NELFE-207ENST00000454913 LMNB2Q03252 620 aa17.73■□□□□ 0.43
NELFE-207ENST00000454913 PTPN14Q15678 1187 aa17.73■□□□□ 0.43
NELFE-207ENST00000454913 PHLDB3Q6NSJ2 640 aa17.73■□□□□ 0.43
NELFE-207ENST00000454913 POTEGQ6S5H5 508 aa17.73■□□□□ 0.43
NELFE-207ENST00000454913 IGSF21Q96ID5 467 aa17.73■□□□□ 0.43
NELFE-207ENST00000454913 SCLT1Q96NL6 688 aa17.73■□□□□ 0.43
NELFE-207ENST00000454913 ZNF302Q9NR11 478 aa17.73■□□□□ 0.43
NELFE-207ENST00000454913 CHD8Q9HCK8 2581 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 PRR5-ARHGAP8B1AHC4 643 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 ATG7O95352 703 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 C22orf31O95567 290 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 SSBP05455 408 aaKnown RBP eCLIP17.72■□□□□ 0.43
NELFE-207ENST00000454913 CLCN4P51793 760 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 ARHGAP8P85298 464 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 ITGB3BPQ13352 177 aaPredicted RBP17.72■□□□□ 0.43
NELFE-207ENST00000454913 DCLRE1AQ6PJP8 1040 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 RALYLQ86SE5 291 aaKnown RBP17.72■□□□□ 0.43
NELFE-207ENST00000454913 CCDC60Q8IWA6 550 aaPredicted RBP17.72■□□□□ 0.43
NELFE-207ENST00000454913 PJA1Q8NG27 643 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 ZNF668Q96K58 619 aaPredicted RBP17.72■□□□□ 0.43
NELFE-207ENST00000454913 MAP7D2Q96T17 732 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 FOXQ1Q9C009 403 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 USP18Q9UMW8 372 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 CHD6Q8TD26 2715 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 GPR179Q6PRD1 2367 aa17.72■□□□□ 0.43
NELFE-207ENST00000454913 BAHCC1Q9P281 2608 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 IGKV6D-21A0A0A0MT36 114 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 A0A0U1RQF3 1178 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 CARNS1A5YM72 827 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 ZBTB42B2RXF5 422 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 HIP1O00291 1037 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 SPTLC1O15269 473 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 CLCN3P51790 818 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 RNASELQ05823 741 aaKnown RBP17.71■□□□□ 0.43
NELFE-207ENST00000454913 BCL7CQ8WUZ0 217 aaPredicted RBP17.71■□□□□ 0.43
NELFE-207ENST00000454913 KLHL5Q96PQ7 755 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 MYL10Q9BUA6 226 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 LNPKQ9C0E8 428 aa17.71■□□□□ 0.43
NELFE-207ENST00000454913 GBP3Q9H0R5 595 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms