RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 KSR1Q8IVT5 923 aa21.47■■□□□ 1.03
COL9A2-204ENST00000427563 SAMD11Q96NU1 681 aa21.47■■□□□ 1.03
COL9A2-204ENST00000427563 DHX33Q9H6R0 707 aaKnown RBP21.47■■□□□ 1.03
COL9A2-204ENST00000427563 LMCD1Q9NZU5 365 aa21.47■■□□□ 1.03
COL9A2-204ENST00000427563 PCDHA12Q9UN75 941 aa21.47■■□□□ 1.03
COL9A2-204ENST00000427563 MRPL42Q9Y6G3 142 aaKnown RBP21.47■■□□□ 1.03
COL9A2-204ENST00000427563 BRWD1Q9NSI6 2320 aa21.47■■□□□ 1.03
COL9A2-204ENST00000427563 A0A087WZ62 844 aa21.46■■□□□ 1.03
COL9A2-204ENST00000427563 C5orf67F2Z3F1 127 aa21.46■■□□□ 1.03
COL9A2-204ENST00000427563 IBSPP21815 317 aaPredicted RBP21.46■■□□□ 1.03
COL9A2-204ENST00000427563 YWHABP31946 246 aaKnown RBP21.46■■□□□ 1.03
COL9A2-204ENST00000427563 MCM7P33993 719 aa21.46■■□□□ 1.03
COL9A2-204ENST00000427563 NBR1Q14596 966 aa21.46■■□□□ 1.03
COL9A2-204ENST00000427563 SAFBQ15424 915 aaKnown RBP eCLIP21.46■■□□□ 1.03
COL9A2-204ENST00000427563 FAM184AQ8NB25 1140 aa21.46■■□□□ 1.03
COL9A2-204ENST00000427563 FDXACB1Q9BRP7 624 aaPredicted RBP21.46■■□□□ 1.03
COL9A2-204ENST00000427563 RNF19AQ9NV58 838 aa21.46■■□□□ 1.03
COL9A2-204ENST00000427563 SUCLA2Q9P2R7 463 aaPredicted RBP21.46■■□□□ 1.03
COL9A2-204ENST00000427563 THEGQ9P2T0 379 aa21.46■■□□□ 1.03
COL9A2-204ENST00000427563 PLXNA4Q9HCM2 1894 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 A0A087WWV3 80 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 POTEMA6NI47 508 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 CTNNB1P35222 781 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 BMPR1AP36894 532 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 GPM6BQ13491 265 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 BTG3Q14201 252 aaPredicted RBP21.45■■□□□ 1.02
COL9A2-204ENST00000427563 ZNF174Q15697 407 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 PAN2Q504Q3 1202 aaKnown RBP21.45■■□□□ 1.02
COL9A2-204ENST00000427563 FAM102BQ5T8I3 360 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 SLC24A5Q71RS6 500 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 NOSTRINQ8IVI9 506 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 CMTR2Q8IYT2 770 aaKnown RBP21.45■■□□□ 1.02
COL9A2-204ENST00000427563 C4orf32Q8N8J7 132 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 CEP170P1Q96L14 293 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 ZSWIM4Q9H7M6 989 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 C1orf112Q9NSG2 853 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 BMP2KQ9NSY1 1161 aaPredicted RBP21.45■■□□□ 1.02
COL9A2-204ENST00000427563 HCSTQ9UBK5 93 aa21.45■■□□□ 1.02
COL9A2-204ENST00000427563 DENND3A2RUS2 1198 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 ST18O60284 1047 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 LYPLA2O95372 231 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 STAG3L1P0CL83 205 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 U2AF2P26368 475 aaKnown RBP eCLIP21.44■■□□□ 1.02
COL9A2-204ENST00000427563 TOB1P50616 345 aaPredicted RBP21.44■■□□□ 1.02
COL9A2-204ENST00000427563 TFF2Q03403 129 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 ODR4Q5SWX8 454 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 RHPN2Q8IUC4 686 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 TPH2Q8IWU9 490 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 ZNF710Q8N1W2 664 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 NLRP7Q8WX94 980 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 TMEM143Q96AN5 459 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 XPNPEP1Q9NQW7 623 aa21.44■■□□□ 1.02
COL9A2-204ENST00000427563 GRM6O15303 877 aa21.43■■□□□ 1.02
COL9A2-204ENST00000427563 DKC1O60832 514 aaKnown RBP eCLIP21.43■■□□□ 1.02
COL9A2-204ENST00000427563 SPATA31C1P0DKV0 1188 aa21.43■■□□□ 1.02
COL9A2-204ENST00000427563 FGFR1P11362 822 aa21.43■■□□□ 1.02
COL9A2-204ENST00000427563 MRPL38Q96DV4 380 aaKnown RBP21.43■■□□□ 1.02
COL9A2-204ENST00000427563 IFT122Q9HBG6 1241 aa21.43■■□□□ 1.02
COL9A2-204ENST00000427563 TCF20Q9UGU0 1960 aaKnown RBP21.43■■□□□ 1.02
COL9A2-204ENST00000427563 ATF7P17544 494 aaPredicted RBP21.42■■□□□ 1.02
COL9A2-204ENST00000427563 XKR9Q5GH70 373 aa21.42■■□□□ 1.02
COL9A2-204ENST00000427563 TTC38Q5R3I4 469 aa21.42■■□□□ 1.02
COL9A2-204ENST00000427563 FAM43BQ6ZT52 329 aaPredicted RBP21.42■■□□□ 1.02
COL9A2-204ENST00000427563 ATXN2LQ8WWM7 1075 aaKnown RBP21.42■■□□□ 1.02
COL9A2-204ENST00000427563 UPF2Q9HAU5 1272 aaKnown RBP21.42■■□□□ 1.02
COL9A2-204ENST00000427563 LRFN2Q9ULH4 789 aa21.42■■□□□ 1.02
COL9A2-204ENST00000427563 PPME1Q9Y570 386 aa21.42■■□□□ 1.02
COL9A2-204ENST00000427563 PCDHB7Q9Y5E2 793 aa21.42■■□□□ 1.02
COL9A2-204ENST00000427563 MUC3AQ02505 3323 aa21.42■■□□□ 1.02
COL9A2-204ENST00000427563 MED24O75448 989 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 RB1P06400 928 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 RFC5P40937 340 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 DNM2P50570 870 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 POLGP54098 1239 aaPredicted RBP21.41■■□□□ 1.02
COL9A2-204ENST00000427563 CAMK1Q14012 370 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 EMC2Q15006 297 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 SKIV2LQ15477 1246 aaKnown RBP21.41■■□□□ 1.02
COL9A2-204ENST00000427563 TJAP1Q5JTD0 557 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 ZNF410Q86VK4 478 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 ECHDC2Q86YB7 292 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 NEK9Q8TD19 979 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 PRPF31Q8WWY3 499 aaKnown RBP21.41■■□□□ 1.02
COL9A2-204ENST00000427563 NLRP4Q96MN2 994 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 SCLT1Q96NL6 688 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 ASB2Q96Q27 587 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 GCOM2Q9BZD3 368 aaPredicted RBP21.41■■□□□ 1.02
COL9A2-204ENST00000427563 ELAC1Q9H777 363 aaKnown RBP21.41■■□□□ 1.02
COL9A2-204ENST00000427563 TMEM161AQ9NX61 479 aa21.41■■□□□ 1.02
COL9A2-204ENST00000427563 OR52Z1P0C646 297 aa21.4■■□□□ 1.02
COL9A2-204ENST00000427563 DNAJB1P25685 340 aa21.4■■□□□ 1.02
COL9A2-204ENST00000427563 TECP42680 631 aa21.4■■□□□ 1.02
COL9A2-204ENST00000427563 ZNF598Q86UK7 904 aaKnown RBP21.4■■□□□ 1.02
COL9A2-204ENST00000427563 PIGOQ8TEQ8 1089 aa21.4■■□□□ 1.02
COL9A2-204ENST00000427563 SLC7A3Q8WY07 619 aa21.4■■□□□ 1.02
COL9A2-204ENST00000427563 JPH2Q9BR39 696 aaPredicted RBP21.4■■□□□ 1.02
COL9A2-204ENST00000427563 BACH2Q9BYV9 841 aa21.4■■□□□ 1.02
COL9A2-204ENST00000427563 MINDY3Q9H8M7 445 aa21.4■■□□□ 1.02
COL9A2-204ENST00000427563 PCDHB6Q9Y5E3 794 aa21.4■■□□□ 1.02
COL9A2-204ENST00000427563 COL4A3BPQ9Y5P4 624 aa21.4■■□□□ 1.02
COL9A2-204ENST00000427563 TBKBP1A7MCY6 615 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms