RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 C15orf39Q6ZRI6 1047 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 ABI1Q8IZP0 508 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 KDF1Q8NAX2 398 aaPredicted RBP10.58□□□□□ -0.72
LSG1-202ENST00000427461 SEPT1Q8WYJ6 367 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 TMEM169Q96HH4 297 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 PCYT2Q99447 389 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 LRRCC1Q9C099 1032 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 WDR6Q9NNW5 1121 aaKnown RBP10.58□□□□□ -0.72
LSG1-202ENST00000427461 SLC2A4RGQ9NR83 387 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 MAP3K20Q9NYL2 800 aaKnown RBP10.58□□□□□ -0.72
LSG1-202ENST00000427461 IRAK3Q9Y616 596 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 NUMBLQ9Y6R0 609 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 SRRM3A6NNA2 597 aaPredicted RBP10.57□□□□□ -0.72
LSG1-202ENST00000427461 GCOM1H8Y6P7 765 aaPredicted RBP10.57□□□□□ -0.72
LSG1-202ENST00000427461 RPLP2P05387 115 aaKnown RBP10.57□□□□□ -0.72
LSG1-202ENST00000427461 POLR2MP0CAP2 368 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 CLCN4P51793 760 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 HTR4Q13639 388 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 DSC3Q14574 896 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 BMS1Q14692 1282 aaKnown RBP10.57□□□□□ -0.72
LSG1-202ENST00000427461 IL31Q6EBC2 164 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 LAIR1Q6GTX8 287 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 FAM228AQ86W67 206 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 STAG2Q8N3U4 1231 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 RNF169Q8NCN4 708 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 BCL7CQ8WUZ0 217 aaPredicted RBP10.57□□□□□ -0.72
LSG1-202ENST00000427461 MAP4K1Q92918 833 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 NXPE3Q969Y0 559 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 SHDQ96IW2 340 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 KLHL5Q96PQ7 755 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 SENP7Q9BQF6 1050 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 DDX23Q9BUQ8 820 aaKnown RBP10.57□□□□□ -0.72
LSG1-202ENST00000427461 SMARCAD1Q9H4L7 1026 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 PKD2L1Q9P0L9 805 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 RAB23Q9ULC3 237 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 FLNBO75369 2602 aaKnown RBP10.57□□□□□ -0.72
LSG1-202ENST00000427461 LOC400499M0QZD8 3231 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 IGF2RP11717 2491 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 CLUHO75153 1309 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 EVPLQ92817 2033 aa10.57□□□□□ -0.72
LSG1-202ENST00000427461 CCDC195A0A1B0GUA6 201 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 SMIM35A0A1B0GVV1 85 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 TM4SF5O14894 197 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 GPR182O15218 404 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 FGAP02671 866 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 RETP07949 1114 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 LAMP2P13473 410 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 KCNA2P16389 499 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 SPINK2P20155 84 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 KLRC2P26717 231 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 ALDH7A1P49419 539 aaKnown RBP10.56□□□□□ -0.72
LSG1-202ENST00000427461 CSRP2Q16527 193 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 ASPRV1Q53RT3 343 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 MTHFD1LQ6UB35 978 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 PRR23BQ6ZRT6 265 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 PPFIBP1Q86W92 1011 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 NME8Q8N427 588 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 HELQQ8TDG4 1101 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 DDX1Q92499 740 aaKnown RBP10.56□□□□□ -0.72
LSG1-202ENST00000427461 OSMRQ99650 979 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 MYL10Q9BUA6 226 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 VN1R3Q9BXE9 311 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 FRMPD4Q14CM0 1322 aa10.56□□□□□ -0.72
LSG1-202ENST00000427461 ASH1LQ9NR48 2969 aaKnown RBP10.56□□□□□ -0.72
LSG1-202ENST00000427461 DSPP15924 2871 aaKnown RBP10.55□□□□□ -0.72
LSG1-202ENST00000427461 CYSRT1A8MQ03 144 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 ANHXE9PGG2 379 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 TAF4O00268 1085 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 HOXA2O43364 376 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 ZC3H11AO75152 810 aaKnown RBP eCLIP10.55□□□□□ -0.72
LSG1-202ENST00000427461 RFPL2O75678 378 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 STAM2O75886 525 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 SSBP05455 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
LSG1-202ENST00000427461 CNPP09543 421 aaKnown RBP10.55□□□□□ -0.72
LSG1-202ENST00000427461 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
LSG1-202ENST00000427461 GIT2Q14161 759 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 MLF2Q15773 248 aaPredicted RBP10.55□□□□□ -0.72
LSG1-202ENST00000427461 SLC44A4Q53GD3 710 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 GET4Q7L5D6 327 aaPredicted RBP10.55□□□□□ -0.72
LSG1-202ENST00000427461 DDX53Q86TM3 631 aaKnown RBP10.55□□□□□ -0.72
LSG1-202ENST00000427461 ECHDC2Q86YB7 292 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 HOMER1Q86YM7 354 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 TBC1D10CQ8IV04 446 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 STAMQ92783 540 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 FGF14Q92915 247 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 MTMR8Q96EF0 704 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
LSG1-202ENST00000427461 LTB4R2Q9NPC1 389 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 PRMT8Q9NR22 394 aaPredicted RBP10.55□□□□□ -0.72
LSG1-202ENST00000427461 MAN1C1Q9NR34 630 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 RXFP3Q9NSD7 469 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 NEDD4P46934 1319 aa10.55□□□□□ -0.72
LSG1-202ENST00000427461 DMXL2Q8TDJ6 3036 aa10.54□□□□□ -0.72
LSG1-202ENST00000427461 ZBTB5O15062 677 aa10.54□□□□□ -0.72
LSG1-202ENST00000427461 INPPL1O15357 1258 aa10.54□□□□□ -0.72
LSG1-202ENST00000427461 LRP3O75074 770 aa10.54□□□□□ -0.72
LSG1-202ENST00000427461 TOP3BO95985 862 aaKnown RBP10.54□□□□□ -0.72
LSG1-202ENST00000427461 TDGF1P13385 188 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms