RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PARP1P09874 1014 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 IFIT1P09914 478 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 SYN1P17600 705 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 S100A5P33763 92 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 ATP6V1E1P36543 226 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 GNL1P36915 607 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 PEX5P50542 639 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 GUCY2FP51841 1108 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 KIF11P52732 1056 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CASP7P55210 303 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 GJA9P57773 515 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 NFKB2Q00653 900 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CYP4A11Q02928 519 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 ZP2Q05996 745 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CACNB2Q08289 660 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 PSMD6Q15008 389 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 TCEA2Q15560 299 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 TBC1D25Q3MII6 688 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 TM4SF20Q53R12 229 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 MUM1L1Q5H9M0 696 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 VPS53Q5VIR6 699 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CXorf57Q6NSI4 855 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 C1orf228Q6PIY5 440 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 TMCO3Q6UWJ1 677 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 ARHGAP27Q6ZUM4 889 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CYFIP1Q7L576 1253 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 FASTKD5Q7L8L6 764 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 VPS52Q8N1B4 723 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 SYNPOQ8N3V7 929 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 AFAP1Q8N556 730 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 USP38Q8NB14 1042 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 RASSF8Q8NHQ8 419 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 GOLGA5Q8TBA6 731 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 MGARPQ8TDB4 240 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 TIFAQ96CG3 184 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 HOOK2Q96ED9 719 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CHFRQ96EP1 664 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 RBM14Q96PK6 669 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 C7orf25Q9BPX7 421 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 ALG1Q9BT22 464 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 PI4K2AQ9BTU6 479 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 TTPALQ9BTX7 342 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 LSM14BQ9BX40 385 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CEP44Q9C0F1 390 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 LMAN2LQ9H0V9 348 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 ELAC1Q9H777 363 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CAAP1Q9H8G2 361 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 FBRSQ9HAH7 460 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 PAPOLBQ9NRJ5 636 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 HELLSQ9NRZ9 838 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CALCOCO1Q9P1Z2 691 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 HECAQ9UBI9 543 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 FAM8A1Q9UBU6 413 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 GJD2Q9UKL4 321 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 MTF2Q9Y483 593 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 FSD2A1L4K1 749 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 TCAF2A6NFQ2 919 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 LACTBL1A8MY62 500 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 FAM155AB1AL88 458 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ELL2O00472 640 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 APAF1O14727 1248 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ZSCAN9O15535 394 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 PSPNO60542 156 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 NMT2O60551 498 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ZNF254O75437 659 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 KATNA1O75449 491 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ERLIN1O75477 346 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 EOMESO95936 686 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 PAHP00439 452 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 CTSHP09668 335 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 STMN1P16949 149 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 GNAT2P19087 354 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 XPAP23025 273 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 TMOD1P28289 359 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 GNA15P30679 374 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 HOXC12P31275 282 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 SOX5P35711 763 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ETFBP38117 255 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 MATR3P43243 847 aaKnown RBP eCLIP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 ASMTP46597 345 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 SEPHS1P49903 392 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 EVCP57679 992 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 MPP1Q00013 466 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 APOBRQ0VD83 1088 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 GRM1Q13255 1194 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 PPP2R5DQ14738 602 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 SLC9A5Q14940 896 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 CLUL1Q15846 466 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 NKPD1Q17RQ9 610 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 KIAA0753Q2KHM9 967 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 PROSER3Q2NL68 480 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 GNPTABQ3T906 1256 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 HHATQ5VTY9 493 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 DIEXFQ68CQ4 756 aaKnown RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 KDELC1Q6UW63 502 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 LDHAL6AQ6ZMR3 332 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 INTS8Q75QN2 995 aaKnown RBP4.05□□□□□ -1.76
SF3B1-203ENST00000414174 HS2ST1Q7LGA3 356 aa4.05□□□□□ -1.76
SF3B1-203ENST00000414174 GGNQ86UU5 652 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms