RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 DDX56Q9NY93 547 aaKnown RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 NUMA1Q14980 2115 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 SLC7A5Q01650 507 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 ZYXQ15942 572 aaKnown RBP12.93□□□□□ -0.34
SHANK2-203ENST00000409161 GJC2Q5T442 439 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-203ENST00000409161 HPCAL4Q9UM19 191 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 TTC37Q6PGP7 1564 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 LZTS3O60299 673 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-203ENST00000409161 RASSF9O75901 435 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 FTCDO95954 541 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 GSPT1P15170 499 aaKnown RBP12.93□□□□□ -0.34
SHANK2-203ENST00000409161 ITPRIPL1Q6GPH6 555 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 GPIHBP1Q8IV16 184 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 KSR1Q8IVT5 923 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 GTSE1Q9NYZ3 720 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 TFDP2Q14188 446 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 TAGAPQ8N103 731 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 SLC26A7Q8TE54 656 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 FAM161BQ96MY7 647 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 SLC9A1P19634 815 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 HSPA9P38646 679 aaKnown RBP12.93□□□□□ -0.34
SHANK2-203ENST00000409161 C16orf89Q6UX73 402 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 AGGF1Q8N302 714 aaeCLIP12.93□□□□□ -0.342e-7■■■■■ 29
SHANK2-203ENST00000409161 OLFML3Q9NRN5 406 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 GINM1Q9NU53 330 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 hCG_1642624A0A1W2PR95 340 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 ZRANB2O95218 330 aaKnown RBP eCLIP12.93□□□□□ -0.34
SHANK2-203ENST00000409161 TBXAS1P24557 533 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-203ENST00000409161 CCNE1P24864 410 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 APOA5Q6Q788 366 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 EYA1Q99502 592 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 FAM187AA6NFU0 413 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 FGAP02671 866 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 CCND1P24385 295 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 NCAPG2Q86XI2 1143 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 LARGE2Q8N3Y3 721 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.93□□□□□ -0.343e-7■□□□□ 9.7
SHANK2-203ENST00000409161 TRIM54Q9BYV2 358 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 SELENONQ9NZV5 590 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 MLH3Q9UHC1 1453 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 WDR62O43379 1518 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 A0A0D9SFI3 127 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 ARFIP2P53365 341 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 GRM1Q13255 1194 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 KRT72Q14CN4 511 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 ANKRD13CQ8N6S4 541 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 ABHD10Q9NUJ1 306 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 ASNSD1Q9NWL6 643 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
SHANK2-203ENST00000409161 KPNB1Q14974 876 aaKnown RBP12.92□□□□□ -0.34
SHANK2-203ENST00000409161 PI4K2BQ8TCG2 481 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 ZNF556Q9HAH1 456 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 PMS2P54278 862 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 POLA2Q14181 598 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 CC2D1AQ6P1N0 951 aaPredicted RBP12.92□□□□□ -0.34
SHANK2-203ENST00000409161 SUCLG2Q96I99 432 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 NRBP1Q9UHY1 535 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 USP17L21D6R901 530 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 CDC27P30260 824 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 CCNA1P78396 465 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 TFAMQ00059 246 aaKnown RBP12.92□□□□□ -0.34
SHANK2-203ENST00000409161 DMC1Q14565 340 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 RAPGEF5Q92565 580 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 AKT3Q9Y243 479 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 USP19O94966 1318 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 WBP4O75554 376 aaKnown RBP12.92□□□□□ -0.34
SHANK2-203ENST00000409161 ZSCAN20P17040 1043 aaPredicted RBP12.92□□□□□ -0.34
SHANK2-203ENST00000409161 LAMB3Q13751 1172 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 TOGARAM2Q6ZUX3 1019 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
SHANK2-203ENST00000409161 ABHD8Q96I13 439 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 FAM129AQ9BZQ8 928 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 CCDC134Q9H6E4 229 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 STAP2Q9UGK3 403 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 RCOR1Q9UKL0 485 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 FRMPD2Q68DX3 1309 aaPredicted RBP12.92□□□□□ -0.34
SHANK2-203ENST00000409161 ADCY1Q08828 1119 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 PDCLQ13371 301 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 ALKBH5Q6P6C2 394 aaKnown RBP12.92□□□□□ -0.34
SHANK2-203ENST00000409161 HIPK4Q8NE63 616 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 ULK4Q96C45 1275 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 BEGAINQ9BUH8 593 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 SYBUQ9NX95 663 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 ARL2BPQ9Y2Y0 163 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 GJA3Q9Y6H8 435 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 ANGPT2O15123 496 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 TCP10Q12799 353 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 KIF22Q14807 665 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 CATSPER3Q86XQ3 398 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 CDC26Q8NHZ8 85 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 CLIC6Q96NY7 704 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 NDEL1Q9GZM8 345 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 SLC24A3Q9HC58 644 aa12.92□□□□□ -0.34
SHANK2-203ENST00000409161 MORC2Q9Y6X9 1032 aaPredicted RBP12.92□□□□□ -0.34
SHANK2-203ENST00000409161 CDC42BPBQ9Y5S2 1711 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 SCFD1Q8WVM8 642 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms