RNA–Protein interactions for RNA: ENST00000408671.3

MIR1249-201, Transcript of microRNA 1249, humanhuman

BASIC

Gene MIR1249, Length 66 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR1249-201ENST00000408671 COL1A2P08123 1366 aa12.94□□□□□ -0.34
MIR1249-201ENST00000408671 IGKV6D-21A0A0A0MT36 114 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 ZBTB42B2RXF5 422 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 STK25O00506 426 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 GPR32O75388 356 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 ATG7O95352 703 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 TGM1P22735 817 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 METAP2P50579 478 aaKnown RBP eCLIP12.93□□□□□ -0.34
MIR1249-201ENST00000408671 BCAR1P56945 870 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 LMNB2Q03252 620 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 TROAPQ12815 778 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 SPECC1Q5M775 1068 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
MIR1249-201ENST00000408671 PPFIBP1Q86W92 1011 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 ECHDC2Q86YB7 292 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 RSAD2Q8WXG1 361 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 CUL5Q93034 780 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 RHOBTB2Q9BYZ6 727 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 ARHGEF3Q9NR81 526 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 EPS15L1Q9UBC2 864 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 CA14Q9ULX7 337 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 SIT1Q9Y3P8 196 aa12.93□□□□□ -0.34
MIR1249-201ENST00000408671 NFASCO94856 1347 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 FASNP49327 2511 aaKnown RBP12.92□□□□□ -0.34
MIR1249-201ENST00000408671 NT5C1B-RDH14C9J2C7 533 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 HBP1O60381 514 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 ALDH7A1P49419 539 aaKnown RBP12.92□□□□□ -0.34
MIR1249-201ENST00000408671 ACTR2P61160 394 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 NONOQ15233 471 aaKnown RBP eCLIP12.92□□□□□ -0.34
MIR1249-201ENST00000408671 KIZQ2M2Z5 673 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 CYB5R4Q7L1T6 521 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 DDX53Q86TM3 631 aaKnown RBP12.92□□□□□ -0.34
MIR1249-201ENST00000408671 SLC44A3Q8N4M1 653 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 CMASQ8NFW8 434 aaPredicted RBP12.92□□□□□ -0.34
MIR1249-201ENST00000408671 PJA1Q8NG27 643 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 GPR152Q8TDT2 470 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 NXPE3Q969Y0 559 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 MRPL9Q9BYD2 267 aaKnown RBP12.92□□□□□ -0.34
MIR1249-201ENST00000408671 NCDNQ9UBB6 729 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 CDV3Q9UKY7 258 aaKnown RBP12.92□□□□□ -0.34
MIR1249-201ENST00000408671 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 COL4A3Q01955 1670 aa12.92□□□□□ -0.34
MIR1249-201ENST00000408671 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
MIR1249-201ENST00000408671 SPEGQ15772 3267 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 ZZEF1O43149 2961 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 A0A0U1RQF3 1178 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 DCDC2BA2VCK2 349 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 PAPLNO95428 1278 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 RFX1P22670 979 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 CA8P35219 290 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 CLCN4P51793 760 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 WTAPQ15007 396 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 PTPN14Q15678 1187 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 IMMTQ16891 758 aaKnown RBP12.91□□□□□ -0.34
MIR1249-201ENST00000408671 ZBTB44Q8NCP5 570 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 NELL1Q92832 810 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 IGSF21Q96ID5 467 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 DSCC1Q9BVC3 393 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 VN1R3Q9BXE9 311 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 SLC2A4RGQ9NR83 387 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 KCNH7Q9NS40 1196 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 FBXO4Q9UKT5 387 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 PCDHGA2Q9Y5H1 932 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 DOCK6Q96HP0 2047 aa12.91□□□□□ -0.34
MIR1249-201ENST00000408671 CARNS1A5YM72 827 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 LILRB5O75023 590 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 C22orf31O95567 290 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 SDSP20132 328 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 STARD6P59095 220 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 HELQQ8TDG4 1101 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 BCL7CQ8WUZ0 217 aaPredicted RBP12.9□□□□□ -0.34
MIR1249-201ENST00000408671 RSPH1Q8WYR4 309 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 PPP1R16BQ96T49 567 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 SPZ1Q9BXG8 430 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 FOXQ1Q9C009 403 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 EPC1Q9H2F5 836 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
MIR1249-201ENST00000408671 WDR6Q9NNW5 1121 aaKnown RBP12.9□□□□□ -0.34
MIR1249-201ENST00000408671 LILRB3O75022 631 aa12.89□□□□□ -0.35
MIR1249-201ENST00000408671 VTNP04004 478 aa12.89□□□□□ -0.35
MIR1249-201ENST00000408671 ZSCAN20P17040 1043 aaPredicted RBP12.89□□□□□ -0.35
MIR1249-201ENST00000408671 ITGB3BPQ13352 177 aaPredicted RBP12.89□□□□□ -0.35
MIR1249-201ENST00000408671 ZNF484Q5JVG2 852 aa12.89□□□□□ -0.35
MIR1249-201ENST00000408671 CYP26C1Q6V0L0 522 aa12.89□□□□□ -0.35
MIR1249-201ENST00000408671 TMEM87AQ8NBN3 555 aa12.89□□□□□ -0.35
MIR1249-201ENST00000408671 KLHL5Q96PQ7 755 aa12.89□□□□□ -0.35
MIR1249-201ENST00000408671 MYADMQ96S97 322 aa12.89□□□□□ -0.35
MIR1249-201ENST00000408671 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
MIR1249-201ENST00000408671 RCAN3Q9UKA8 241 aa12.89□□□□□ -0.35
MIR1249-201ENST00000408671 SMG5Q9UPR3 1016 aaKnown RBP12.89□□□□□ -0.35
MIR1249-201ENST00000408671 RALGAPA1Q6GYQ0 2036 aa12.89□□□□□ -0.35
MIR1249-201ENST00000408671 CLUHO75153 1309 aa12.88□□□□□ -0.35
MIR1249-201ENST00000408671 ANKRD11Q6UB99 2663 aaPredicted RBP12.88□□□□□ -0.35
MIR1249-201ENST00000408671 CEP295Q9C0D2 2601 aa12.88□□□□□ -0.35
MIR1249-201ENST00000408671 ANHXE9PGG2 379 aa12.88□□□□□ -0.35
MIR1249-201ENST00000408671 ZC3H11AO75152 810 aaKnown RBP eCLIP12.88□□□□□ -0.35
MIR1249-201ENST00000408671 LRRN2O75325 713 aa12.88□□□□□ -0.35
MIR1249-201ENST00000408671 CCNE2O96020 404 aa12.88□□□□□ -0.35
MIR1249-201ENST00000408671 CNPP09543 421 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms